Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq34 152 9e-32
seq31 152 9e-32
seq8 152 9e-32
seq5 138 2e-27
seq9 129 1e-24
seq4 120 6e-22
>seq34
Length=15758
Score = 152 bits (168), Expect = 9e-32
Identities = 217/303 (72%), Gaps = 2/303 (1%)
Strand=Plus/Plus
Query 268427 CCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAAC 268486
|||||||||||||||||||| || | ||| | |||||| ||||| ||||||| ||| ||
Sbjct 14875 CCGTTGCACGCGAACATGCCGTACGACTCCCTGTAGTTGACGACGATCCAGTACGCATAC 14934
Query 268487 ATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATT 268546
| ||| || || | || ||| | |||| || || ||||| | || || |
Sbjct 14935 AGCTTGGCGACACCATATGGACTCCTCGGATAAAACGGTGTCGTCTCACTCTGGGGCGTC 14994
Query 268547 TCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTT-TTTTC 268605
|| ||| | || ||||||| || || || || ||||||||| | | || |||||
Sbjct 14995 TCGACGACCTGACCGTAGAGCTCCGACGTGGAAGCCTGGTAGAACCT-GACGTGCTTTTC 15053
Query 268606 GAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGC 268665
||||||||| |||||||||| || || | || || ||||||| || || ||||| |
Sbjct 15054 GAGACCGCACGTTCGGATTGCGTCCAGAATGCGGAGCGTTCCCAATCCGTCAACGTCGCC 15113
Query 268666 TGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAAC 268725
|| ||||| | |||||| || || |||| |||||| |||||| ||||||| || |
Sbjct 15114 CGTGTACTCGGCCATCTCAAACGAGACCTTGACATGCGACTGGGCAGCCAGGTTGTAGAT 15173
Query 268726 CTC 268728
|||
Sbjct 15174 CTC 15176
>seq31
Length=21528
Score = 152 bits (168), Expect = 9e-32
Identities = 217/303 (72%), Gaps = 2/303 (1%)
Strand=Plus/Minus
Query 268427 CCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAAC 268486
|||||||||||||||||||| || | ||| | |||||| ||||| ||||||| ||| ||
Sbjct 3879 CCGTTGCACGCGAACATGCCGTACGACTCCCTGTAGTTGACGACGATCCAGTACGCATAC 3820
Query 268487 ATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATT 268546
| ||| || || | || ||| | |||| || || ||||| | || || |
Sbjct 3819 AGCTTGGCGACACCATATGGACTCCTCGGATAAAACGGTGTCGTCTCACTCTGGGGCGTC 3760
Query 268547 TCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTT-TTTTC 268605
|| ||| | || ||||||| || || || || ||||||||| | | || |||||
Sbjct 3759 TCGACGACCTGACCGTAGAGCTCCGACGTGGAAGCCTGGTAGAACCT-GACGTGCTTTTC 3701
Query 268606 GAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGC 268665
||||||||| |||||||||| || || | || || ||||||| || || ||||| |
Sbjct 3700 GAGACCGCACGTTCGGATTGCGTCCAGAATGCGGAGCGTTCCCAATCCGTCAACGTCGCC 3641
Query 268666 TGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAAC 268725
|| ||||| | |||||| || || |||| |||||| |||||| ||||||| || |
Sbjct 3640 CGTGTACTCGGCCATCTCAAACGAGACCTTGACATGCGACTGGGCAGCCAGGTTGTAGAT 3581
Query 268726 CTC 268728
|||
Sbjct 3580 CTC 3578
>seq8
Length=1050647
Score = 152 bits (168), Expect = 9e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || ||||| || | ||||| || || || ||||| ||||||||||| || ||||
Sbjct 744583 TTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGG 744524
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
|||| || | || ||||| | || || |||||||| || | || || || || || |
Sbjct 744523 AGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAG 744464
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| || |||||||||||||||||||| | ||| || ||||| || || | || || |
Sbjct 744463 GGATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGA 744404
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| | ||||||||||| || || | ||||||||||| || |||||
Sbjct 744403 CTTCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355
Score = 122 bits (134), Expect = 2e-22
Identities = 133/177 (75%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345
||||| || | |||||| |||||||| | |||||| || || || || || | || ||
Sbjct 744758 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 744699
Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405
|| |||||||| || ||||||||||||||||| | || ||| ||||| || || |
Sbjct 744698 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACGTTATCGATCGTATCGGAA 744639
Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| ||||| ||||| ||||| ||||| || || | || ||||| || || ||||||
Sbjct 744638 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 744582
Score = 118 bits (130), Expect = 2e-21
Identities = 113/145 (78%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 68284 TATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTT 68343
||||||| | |||||||||||| || ||||||||||| || || || | || ||||
Sbjct 743362 TATAATCACTCAATGTCCTCCCATCCTCCAACTGCTTCCCAGCAAAAATCAACCTCTGTT 743303
Query 68344 GGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG 68403
| || |||||||| ||||| || ||||||||||||| ||||| ||||| || ||||
Sbjct 743302 GATCAGGTGGAATACCTTCTTTATCTTGAATCTTTGATTTGACATTATCGATCGTATCTG 743243
Query 68404 CTGATTCTACTTCCAAGGTGATGGT 68428
|||||| ||||| | |||||| ||
Sbjct 743242 ATGATTCGACTTCGAGGGTGATTGT 743218
Score = 109 bits (120), Expect = 1e-18
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345
||||| ||||| || | || || || | || || || ||||| ||||| | ||||||
Sbjct 744218 TAATCAGAGAGAGTACGACCGTCCTCGAGTTGTTTACCCGCGAAGATGAGACGTTGTTGA 744159
Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405
|| ||||| || || ||||||||||||||||| | ||||||| ||||| || || | |
Sbjct 744158 TCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTATCGATAGTATCAGAT 744099
Query 68406 GATTCTACTTCCAAGGTGATGGT 68428
||||| ||||| | |||||||||
Sbjct 744098 GATTCAACTTCGAGGGTGATGGT 744076
>seq5
Length=1209326
Score = 138 bits (152), Expect = 2e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | ||||| || || || ||||| || |||||||| ||||| ||
Sbjct 1116723 CCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGAT 1116782
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| ||||| ||||| || | |||||| || ||||| || | || ||||| || |||||
Sbjct 1116783 AGAGTCCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGG 1116842
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | |||||| ||||||||||| | || || ||
Sbjct 1116843 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 1116902
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAG 68440
|| | ||||||||| || || || ||
Sbjct 1116903 TCGAGGGTGATGGTCTTACCTGTAAG 1116928
>seq9
Length=1075742
Score = 129 bits (142), Expect = 1e-24
Identities = 212/303 (70%), Gaps = 2/303 (1%)
Strand=Plus/Plus
Query 268427 CCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAAC 268486
|| ||||| || |||| || || | || | |||||| || || ||||||||||| ||
Sbjct 361977 CCATTGCAAGCATACATTCCGTACGATTCCCTGTAGTTGACAACGATCCAGTATGCATAC 362036
Query 268487 ATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATT 268546
| |||||| ||| | |||||| | |||| || || || || |||||| ||
Sbjct 362037 AGCTTTGCGACTCCATACGGACTCCTCGGATAAAACGGTGTAGTCTCAGATTGAGGTATC 362096
Query 268547 TCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGT-TTTTTC 268605
|| | || |||||| |||| || || || || ||||||||||| | || || ||||||
Sbjct 362097 TCCTGAACCTTGCCATAGAGTTCCGACGTAGAAGCTTGGTAGAA-TCTGACGTGTTTTTC 362155
Query 268606 GAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGC 268665
| ||||| |||| || || ||||| | ||||| || || | ||||| || || ||
Sbjct 362156 CAAGCCGCATGTTCGAATAGCATCGAGGACTCGAAGTGTGCCTAATCCATCAACATCTGC 362215
Query 268666 TGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAAC 268725
||| ||||| | ||| ||||| || || | ||| || || || || ||||| || |
Sbjct 362216 TGTGTACTCGGCCATTTCGAAGGATACTTTGACGTGAGATTGTGCACCGAGGTTGTAGAA 362275
Query 268726 CTC 268728
|||
Sbjct 362276 CTC 362278
>seq4
Length=1188950
Score = 120 bits (132), Expect = 6e-22
Identities = 145/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTGAGGTG 225507
|||||| ||||||||||||| || |||||||| | ||| ||| || ||| ||||||
Sbjct 817173 AGGAAGTCAGAGTCGTGGGAGACGATGATGGAGGTACA-GTTGGTGAGGGAAGTGAGGTA 817231
Query 225508 CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAG 225567
||||||||| | |||||| || |||| || || ||||| ||||| || || ||
Sbjct 817232 GTCGATGAGCCAGGTGACGTTGACAACATCCAAATGATTGGTAGGCTCGTCGAGGAGAAG 817291
Query 225568 GATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGA 225627
|| ||||| | | | |||||| || | ||||| |||||||| ||||| || |||||
Sbjct 817292 AATATCAGCCTTGAACAAGATGGCTCGAGCGAGAGCGAGCTTCATCTTCCAACCACCGGA 817351
Query 225628 CAGGGAGCCGATTGA 225642
||||| ||||| ||
Sbjct 817352 GAGGGAACCGATCGA 817366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621489897880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |