Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq8 84.2 2e-11 >seq8 Length=1050647 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | ||| ||||||||| || ||||| || | ||||| || |||| || Sbjct 744563 ACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCG 744504 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || || ||||| ||||| || | | |||||| || | || | | |||||||| || Sbjct 744503 AGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCT-TG 744445 Query 42120 ATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | | || | || | | | | ||| ||| || || || |||| ||||||||||| Sbjct 744444 AATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATGGTTTT 744385 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||| || ||||||||||| Sbjct 744384 ACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 42031 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 42090 ||||||||| || |||| | || || |||||||| ||||| || || || ||||||| Sbjct 744760 TGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCT 744701 Query 42091 GGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCG 42149 | || | ||| | | ||||||||| ||| | || | || ||| | | ||| ||| Sbjct 744700 GATCAGGTGGAATACCCTCCTTGTCT-TGAATCTTGGATTTCACGTTATCGATCGTATCG 744642 Query 42150 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || || || | |||||| ||||| || || | || || ||||||||||||||| Sbjct 744641 GAAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 744582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212263577360