Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 >seq1 Length=2435598 Score = 120 bits (132), Expect = 3e-22 Identities = 240/353 (68%), Gaps = 6/353 (2%) Strand=Plus/Plus Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || ||||||||||| || || ||||| | || || |||||||| || ||| ||| Sbjct 130687 CTTTTCAACGCGGGTACACCTCACCCACAACTTTCGTCATGTTTCCTCATCGCGATGAAG 130746 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | || |||||| || || | || | ||||| ||||| | ||||| || Sbjct 130747 GAGGATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCCAAGACA 130806 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || ||||| ||| | ||| || | ||||||| |||||| |||||| ||| Sbjct 130807 GCAGGTGGTATCGGTCTCAACATTCACAACATTCGTGCCAAGGGTTCTTACATCGCTGGT 130866 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG---CGGCG 94140 || || || ||| ||||| |||| |||||||| || | ||| || ||| | || Sbjct 130867 ACAAACGGGTACTCGAACGGTATCGTTCCTATGCTTCGAG-CTT--ACGACGCAACCGCT 130923 Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200 || ||||| || || |||||| | | | ||| |||| || | || |||||||| Sbjct 130924 CGATACGTCGATCAAGGTGGTAACAAGCGACCAGGTGCTTTTGCCATTTACCTCGAGCCA 130983 Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 |||||||| ||||| | || ||||| || ||||| || ||||| || || Sbjct 130984 TGGCACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCACGGTAAAGA 131036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722711460840