Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq8 132 3e-26
seq5 84.2 2e-11
>seq8
Length=1050647
Score = 132 bits (146), Expect = 3e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | || | ||| |||||||| ||||| || ||||| |||||||| ||| |
Sbjct 744581 CCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAG 744522
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| | | ||||||| | |||||| || ||| | ||||| | ||| || || ||
Sbjct 744521 AGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGG 744462
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| ||| ||| |||||| | || || |||||| | || ||
Sbjct 744461 ATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACT 744402
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| | || |||||||||||||||| ||| || || || |||||||||
Sbjct 744401 TCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 744354
>seq5
Length=1209326
Score = 84.2 bits (92), Expect = 2e-11
Identities = 132/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| |||||||| ||||| || || || ||||||||||| ||| | || | || ||
Sbjct 1116741 ACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTCCTACCATCCTCG 1116800
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||||||| | ||||| | |||||| || ||| || || ||||||||
Sbjct 1116801 AGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGG 1116860
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| || ||| | || || || ||| | || || || | ||| ||||| |||
Sbjct 1116861 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTA 1116920
Query 15148 CCTGTCAGA 15156
||||| |||
Sbjct 1116921 CCTGTAAGA 1116929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357391655898515
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |