Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq8 132 3e-26 seq5 84.2 2e-11 >seq8 Length=1050647 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || | ||| |||||||| ||||| || ||||| |||||||| ||| | Sbjct 744581 CCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAG 744522 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | ||||||| | |||||| || ||| | ||||| | ||| || || || Sbjct 744521 AGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGG 744462 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||| ||| |||||| | || || |||||| | || || Sbjct 744461 ATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACT 744402 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || |||||||||||||||| ||| || || || ||||||||| Sbjct 744401 TCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 744354 >seq5 Length=1209326 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || |||||||| ||||| || || || ||||||||||| ||| | || | || || Sbjct 1116741 ACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTCCTACCATCCTCG 1116800 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||||||| | ||||| | |||||| || ||| || || |||||||| Sbjct 1116801 AGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGG 1116860 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| || ||| | || || || ||| | || || || | ||| ||||| ||| Sbjct 1116861 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTA 1116920 Query 15148 CCTGTCAGA 15156 ||||| ||| Sbjct 1116921 CCTGTAAGA 1116929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391655898515