Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq8 105 6e-18 seq5 98.7 9e-16 seq1 95.1 1e-14 >seq8 Length=1050647 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | ||| | |||||||| | |||||||| ||||| || ||||| ||| Sbjct 744582 TCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGA 744523 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| || || || ||||| || ||| | ||||| | ||||||||| ||||| Sbjct 744522 GAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGG 744463 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| || || ||| | | |||| || || | | |||||| Sbjct 744462 GATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGAC 744403 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || | ||||| || |||| ||| || || || || ||||| Sbjct 744402 TTCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355 >seq5 Length=1209326 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | |||||||| || || || |||||||| Sbjct 1116723 CCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGAT 1116782 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | | ||| || ||||| || |||||| ||||||| | ||| ||||| || || Sbjct 1116783 AGAGTCCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGG 1116842 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | |||| |||||| | | ||| || Sbjct 1116843 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 1116902 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGA 127093 |||| ||| | || || || || ||| Sbjct 1116903 TCGAGGGTGATGGTCTTACCTGTAAGA 1116929 >seq1 Length=2435598 Score = 95.1 bits (104), Expect = 1e-14 Identities = 321/489 (66%), Gaps = 17/489 (3%) Strand=Plus/Minus Query 146068 ACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCG 146127 || || || ||||| || ||||| || || | ||| | |||||||||| | |||||| Sbjct 132078 ACGACTTGGAACTCTCCAGCGAGCACACGACGAGTATAGATGTTGCTGGTGTAAGGCTCG 132019 Query 146128 AACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGC 146187 || |||| || || || ||||| | ||||| ||||||||||| ||| ||||| Sbjct 132018 AAGCACTCATTCCATCCCAGGATCTGAGACGTCGACGCGGTAGGCATCGGCGCGACCAGG 131959 Query 146188 AAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTCCACAAA 146247 | |||||||||| |||||| | || || || || | ||||| | ||| | Sbjct 131958 AGGGAGTTTCTCAGACCGTGTTTGGCGATGTTGGCCTTGAGAGTCGACCAGTCCCA-GAG 131900 Query 146248 TGATCCGT-GGGATAGATATTGTAGTTGTCGTAATGCATAGTGC---CGCGGAACAGGGG 146303 ||| || ||| || ||| | |||| | |||| ||| ||| | |||| | Sbjct 131899 TGA--GGTCGGGGTA-ATACCCCACAGGTCGAATTGCAGCCTGCCCTCGCTG-GCAGGAG 131844 Query 146304 GCTATTCT-CGTACGATTCA--TAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTC 146360 || || ||| | ||| || |||| || |||| || || ||||| || ||| Sbjct 131843 ---ATCCTGGGTA--AGTCAGGTAGTGACCCTCAATCTCAGCAAGCTCGCAAGAAGATTC 131789 Query 146361 CAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTGGCCTCCTCGCT 146420 ||||| | ||| |||||||| |||| || ||||| || ||||| || Sbjct 131788 AAGAGCTGCGTGGTAAATGGTCTCAAAGATCTTGAGGTTGAGTTCCCGGGCCTGAGGGCC 131729 Query 146421 GTCGTAGGGGATATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAAC 146480 ||| | || ||| |||| || || || ||||||||||| || | |||| |||||| Sbjct 131728 ATCGAATGGCATACGGAGAGCCATGAATGCATCGGCGAGACCTTGAACGCCGAGACCAAC 131669 Query 146481 GGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCGAT 146540 ||| || || | |||| ||| || ||| | ||| |||| |||| |||||| Sbjct 131668 GGGTCGATGACGCATGTTCGAGTTGCGGGCTTCCGGAACGGGGTAGTAGTTGACGTCGAT 131609 Query 146541 GATCTTGTT 146549 || |||||| Sbjct 131608 GACCTTGTT 131600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500330442960