Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq8 105 6e-18
seq5 98.7 9e-16
seq1 95.1 1e-14
>seq8
Length=1050647
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | ||| | |||||||| | |||||||| ||||| || ||||| |||
Sbjct 744582 TCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGA 744523
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || ||| || || || ||||| || ||| | ||||| | ||||||||| |||||
Sbjct 744522 GAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGG 744463
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || |||||||| || || ||| | | |||| || || | | ||||||
Sbjct 744462 GATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGAC 744403
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||| || | ||||| || |||| ||| || || || || |||||
Sbjct 744402 TTCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355
>seq5
Length=1209326
Score = 98.7 bits (108), Expect = 9e-16
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||||| | |||||||| || || || ||||||||
Sbjct 1116723 CCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGAT 1116782
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | | ||| || ||||| || |||||| ||||||| | ||| ||||| || ||
Sbjct 1116783 AGAGTCCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGG 1116842
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| ||| || ||||| | |||| |||||| | | ||| ||
Sbjct 1116843 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 1116902
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGA 127093
|||| ||| | || || || || |||
Sbjct 1116903 TCGAGGGTGATGGTCTTACCTGTAAGA 1116929
>seq1
Length=2435598
Score = 95.1 bits (104), Expect = 1e-14
Identities = 321/489 (66%), Gaps = 17/489 (3%)
Strand=Plus/Minus
Query 146068 ACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCG 146127
|| || || ||||| || ||||| || || | ||| | |||||||||| | ||||||
Sbjct 132078 ACGACTTGGAACTCTCCAGCGAGCACACGACGAGTATAGATGTTGCTGGTGTAAGGCTCG 132019
Query 146128 AACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGC 146187
|| |||| || || || ||||| | ||||| ||||||||||| ||| |||||
Sbjct 132018 AAGCACTCATTCCATCCCAGGATCTGAGACGTCGACGCGGTAGGCATCGGCGCGACCAGG 131959
Query 146188 AAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTCCACAAA 146247
| |||||||||| |||||| | || || || || | ||||| | ||| |
Sbjct 131958 AGGGAGTTTCTCAGACCGTGTTTGGCGATGTTGGCCTTGAGAGTCGACCAGTCCCA-GAG 131900
Query 146248 TGATCCGT-GGGATAGATATTGTAGTTGTCGTAATGCATAGTGC---CGCGGAACAGGGG 146303
||| || ||| || ||| | |||| | |||| ||| ||| | |||| |
Sbjct 131899 TGA--GGTCGGGGTA-ATACCCCACAGGTCGAATTGCAGCCTGCCCTCGCTG-GCAGGAG 131844
Query 146304 GCTATTCT-CGTACGATTCA--TAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTC 146360
|| || ||| | ||| || |||| || |||| || || ||||| || |||
Sbjct 131843 ---ATCCTGGGTA--AGTCAGGTAGTGACCCTCAATCTCAGCAAGCTCGCAAGAAGATTC 131789
Query 146361 CAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTGGCCTCCTCGCT 146420
||||| | ||| |||||||| |||| || ||||| || ||||| ||
Sbjct 131788 AAGAGCTGCGTGGTAAATGGTCTCAAAGATCTTGAGGTTGAGTTCCCGGGCCTGAGGGCC 131729
Query 146421 GTCGTAGGGGATATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAAC 146480
||| | || ||| |||| || || || ||||||||||| || | |||| ||||||
Sbjct 131728 ATCGAATGGCATACGGAGAGCCATGAATGCATCGGCGAGACCTTGAACGCCGAGACCAAC 131669
Query 146481 GGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCGAT 146540
||| || || | |||| ||| || ||| | ||| |||| |||| ||||||
Sbjct 131668 GGGTCGATGACGCATGTTCGAGTTGCGGGCTTCCGGAACGGGGTAGTAGTTGACGTCGAT 131609
Query 146541 GATCTTGTT 146549
|| ||||||
Sbjct 131608 GACCTTGTT 131600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500330442960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |