Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq8 116 4e-21 seq5 91.5 2e-13 >seq8 Length=1050647 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||| | |||| |||||||||||| ||||||||||| ||||| || |||| ||| Sbjct 744563 ACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCG 744504 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || || || |||||||| ||||| | |||||| || | || | | |||||||| Sbjct 744503 AGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGA 744444 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | ||| ||| || || || || | ||||||||||| Sbjct 744443 ATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATGGTTTTA 744384 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || || || ||||||||||| Sbjct 744383 CCTGTCAAAGTCTTGACGAAGATTTGCAT 744355 >seq5 Length=1209326 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||| | ||| |||||| ||||| ||||| || |||||||| | | || ||| Sbjct 1116741 ACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTCCTACCATCCTCG 1116800 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| ||||| | ||| || || | || | | |||||||||| | Sbjct 1116801 AGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGG 1116860 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||||| | | | |||||| || || || || | |||||||| || Sbjct 1116861 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTA 1116920 Query 46565 CCCGTCAG 46572 || || || Sbjct 1116921 CCTGTAAG 1116928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237841827080