Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq6 118 8e-21 >seq6 Length=1164049 Score = 118 bits (130), Expect = 8e-21 Identities = 717/1140 (63%), Gaps = 10/1140 (1%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 || || ||||| | || ||||| ||| |||||||| | ||| || |||||||| ||| Sbjct 170124 TTGTCGGCGGCGGAGACGTTAAGGATAGAGTTGGCATCGATATCGAAGGTGACTTCGATT 170065 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 || ||||| || | |||| ||||| || || | | || |||| || || Sbjct 170064 TGGGGGACACCACGAGGAGCGGGTGGAATACCGGTGAGCTCGAACTTTCCGAGGAGGTTG 170005 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 ||| || || | |||||||||||| | | ||||| || | | || || Sbjct 170004 CAATCCTTGGTTCGTGCACGTTCACCCTCGTAGACCTGGATGAGCACACCTGGCTGGTTG 169945 Query 517430 TCTGAATAAGTTGTAAATACTCT-GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 517488 || || || || | || | ||| ||| ||||| ||||| || ||||||| | || Sbjct 169944 TCCGAGTAGGTGGAGAAGA-TCTCGGACTTTTTGGTAGGAACGGTGGTGTTTCGCTTGAT 169886 Query 517489 AATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 517548 | |||||| | |||||| || || || | ||| ||| ||||||| ||| || | Sbjct 169885 GAGCGGGGTCATGACACCACCAGCGGTCTCGATACCGGTAGAGAGAGGAGCGACGTCGAG 169826 Query 517549 TAGGACAATATTTTGAAGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAG 517607 | || | || || || ||| | || | | ||| || ||||| ||||||| || Sbjct 169825 CAAGAGGAGATCCTGG-GTCTTTGACGAGGTGTCACCGGTGAGGATAGCGGCTTGAACAG 169767 Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667 ||||||| ||||| || |||||||| || || | | ||| ||| ||| || Sbjct 169766 CAGCACCGTATGCGACGGCTTCATCGGGGTTGATCGAACGGTTTGGTTCACGACCGGAGA 169707 Query 517668 AAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727 | | | || | || | | | || || ||||||| || || || || | || | Sbjct 169706 ACATGTCGGATACGAGCTTTTGAATTTTTGGGATACGAGTGGAACCACCGACGAGGACGA 169647 Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 517787 | || || | || || | ||||| || | ||| || || || || || | Sbjct 169646 TCTCGCTAACGGAAGCCTTGTCGATCTTTGAGTCTTTGAGAACCTTCTCGACCGGGTCCA 169587 Query 517788 GACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 517847 || || || | ||| || || || |||||| ||| | || || || | Sbjct 169586 TGGTCGATCGGAAGAGGTCCTGGCAGAGCTCCTCGAATCGAGCACGGGT--GATCGAAGT 169529 Query 517848 -TATA-ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGA 517905 || | ||| || || || || | || |||| || |||| || || | | ||||| Sbjct 169528 GTAAAGATCGATACCGTCAAAGAGGGAGTCAATCTCGATCGAGGTCTGCGCGGCGGAAGA 169469 Query 517906 TAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG 517965 || | || || ||||||||||| || || | || | || | || || | | | Sbjct 169468 GAGGGTTCGCTTGGCACGTTCACACGCGGTTCGGAGACGACGGAGAGCACGAGC-GTTGG 169410 Query 517966 ATTCAA-ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGAT 518024 || || ||| | || | || |||||||| || | |||| | | || ||||| | Sbjct 169409 ATGAAAGATCCTTCTTGTTCTTCCTCTTGAACTCCTGAACAAAGTGGTTGACGAGACGGT 169350 Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 | || || |||||||| ||||| | || | || | || || | || | ||| | | Sbjct 169349 TGTCGAAGTCTTCACCACCCAAATGGGTGTCACCGGCGGTGGCCTTGACCTCGAAGATAC 169290 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 | || || | || | |||| |||||| || ||||| |||| || || || || | Sbjct 169289 CCTCCTCGATAGTAAGGAGAGATACATCGAAAGTACCACCTCCCAAGTCGAAGATGAGAA 169230 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 | ||| | || | || ||||| || || || || | ||||| |||||||| | Sbjct 169229 CGTTCTTCTCACCTGCGGACTTCTTATCGAGTCCGTATGCGATGGCAGCGGCAGTTGGCT 169170 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 | || || |||| | ||||| |||||||| || || ||||| || || ||||| | Sbjct 169169 CGTTGATGATTCGGAGGACATTGAGACCAGCGATCAAACCGGCATCCTTGGTAGCTTGAC 169110 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 || || ||||| || || || || || || | |||||||| | || || ||| | Sbjct 169109 GCTGAGAGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCATCCTTGACGTCACCACCGA 169050 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 ||||| ||| || | | ||| || | | || ||| || || || | ||||||| Sbjct 169049 GGTAAGCCTCTGCGGTCTCTCGCATCTTGATGAGAACCATGGAAGAGATCTCCTCTGGGG 168990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780818479759774