Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq6 343 2e-89 seq16 111 2e-19 seq1 104 3e-17 seq4 84.2 3e-11 >seq6 Length=1164049 Score = 343 bits (380), Expect = 2e-89 Identities = 833/1252 (67%), Gaps = 22/1252 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 |||||||| | | ||||| || || || |||||| || || || || || || Sbjct 170235 TCATCTTCTGCCCTGTACTTCTCAGCGTCGGCGACCATGCGCTCGATCTCCTCCTTTGAG 170176 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || || ||||| | ||||| | || ||| || | Sbjct 170175 AGACGACCCTTGTCGTTGGTGATGGTGATCTTGCCACTCTTACCGGTGGTCTTGTCGGCG 170116 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || || | ||| || ||||| | |||||| | || | ||||| || | Sbjct 170115 GCGGAGACGTTAAGGATAGAGTTGGCATCGATATCGAAGGTGACTTCGATTTGGGGGACA 170056 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || |||| ||||||||| || | || || | || || | || |||| | Sbjct 170055 CCACGAGGAGCGGGTGGAATACCGGTGAGCTCGAACTTTCCGAGGAGGTTGCAATCCTTG 169996 Query 6809 GCCTTCTT--ACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTG 6866 | ||| | ||||||||| || ||||| | || ||| | || || || || Sbjct 169995 G--TTCGTGCACGTTCACCCTCGTAGACCTGGATGAGCACACCTGGCTGGTTGTCCGAGT 169938 Query 6867 CCGTTGAGAAGATTT-GTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925 || |||||||| | | |||| || | |||| || || |||| | || | |||| Sbjct 169937 AGGTGGAGAAGATCTCGGACTTT-TTGGTAGGAACGGTGGTGTTTCGCTTGATGAGCGGG 169879 Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTC---CAAGAGT 6982 ||||| | |||||| || |||| || ||| ||||| | ||||| |||||| Sbjct 169878 GTCATGACACCACCAGCGGTCTCGATACCGGTAGAGAGAGGAGCGACGTCGAGCAAGAGG 169819 Query 6983 AACA----GGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGT 7038 | |||||| || || || |||| || | ||| |||||||| || | Sbjct 169818 AGATCCTGGGTCTTTGAC-GAGGTGT------CACCGGTGAGGATAGCGGCTTGAACAGC 169766 Query 7039 CGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAA 7098 || ||||||||||| || ||||||||||| |||| || |||| |||| || Sbjct 169765 AGCACCGTATGCGACGGCTTCATCGGGGTTGATCGAACGGTTTGGTTCACGACCGGAGAA 169706 Query 7099 ATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGAT 7158 || |||| | | ||||||||| ||||| || || || |||||||| | ||||| Sbjct 169705 CATGTCGGATACGAGCTTTTGAATTTTTGGGATACGAGTGGAACCACCGACGAGGACGAT 169646 Query 7159 TTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT 7218 || | || | || ||||||||||||||| || || ||||| || ||||| Sbjct 169645 CTCGCTAACGGAAGCCTTGTCGATCTTTGAGTCTTTGAGAACCTTCTCGACCGGGTCCAT 169586 Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATA 7278 ||||| | |||| || || ||||| || || |||||||| || || || || Sbjct 169585 GGTCGATCGGAAGAGGTCCTGGCAGAGCTCCTCGAATCGAGCACGGGTGATCGAAGTGTA 169526 Query 7279 GAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAA 7338 | ||| | ||||| | | || ||||| || || | || || || | ||||| | Sbjct 169525 AAGATCGATACCGTCAAAGAGGGAGTCAATCTCGATCGAGGTCTGCGCGGCGGAAGAGAG 169466 Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 |||||||| || || |||||||| ||||| | |||||| || ||||| | ||| || Sbjct 169465 GGTTCGCTTGGCACGTTCACACGCGGTTCGGAGACGACGGAGAGCACGAGCGTTGGATGA 169406 Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATC 7458 || ||| ||||| | || | || ||||| | | ||||| | ||| | || Sbjct 169405 AAGATCCTTCTTGTTCTTCCTCTTGAACTCCTGAACAAAGTGGTTGACGAGACGGTTGTC 169346 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 ||| |||||||||||||| || || || || ||||| || ||||| || |||||||| | Sbjct 169345 GAAGTCTTCACCACCCAAATGGGTGTCACCGGCGGTGGCCTTGACCTCGAAGATACCCTC 169286 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 || || | | | || ||||| || |||||||| |||| ||| || ||||| ||||| Sbjct 169285 CTCGATAGTAAGGAGAGATACATCGAAAGTACCACCTCCCAAGTCGAAGATGAGAACGTT 169226 Query 7579 CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 | | || | | ||||||||||| ||||| ||||| || || || ||||| || || Sbjct 169225 CTTCTCACCTGCGGACTTCTTATCGAGTCCGTATGCGATGGCAGCGGCAGTTGGCTCGTT 169166 Query 7639 AATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 || || | || |||| || || ||||| || | ||||| || || ||||| || | Sbjct 169165 GATGATTCGGAGGACA-TTGAGACCAGCGATCAAACCGGCATCCTTGGTAGCTTGACGCT 169107 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | || ||||| |||||||| ||||| || ||||| || ||| |||| | |||||| | Sbjct 169106 GAGAGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCATCCTTGACGTCACCACCGAGGT 169047 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 | | || ||| | ||| ||| ||| | |||||||| || || ||||| || Sbjct 169046 AAGCCTCTGCGGTCTCTCGCATCTTGATGAGAACCATGGAAGAGATCTCCTC 168995 >seq16 Length=848844 Score = 111 bits (122), Expect = 2e-19 Identities = 190/276 (69%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||||||||| |||||||| ||||| || ||||| ||||| || || | ||| Sbjct 205391 ATCGAAATCTTCACCTCCCAAGTGGGTATCACCGTTGGTCGACTTGACCTCGAACACACC 205332 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || || | | | || ||||| || ||||||||||| || || ||| | | Sbjct 205331 CTTTTGCATCTCAAGGATGGAGACATCGAATGTACCACCACCAAGATCGTAAACGGCGAT 205272 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | | | | || |||||| || |||||||| |||| || || || || || || Sbjct 205271 GATGGAA------GATTCGTTCTTGTCAAGACCGTAAGCGAGGGCAGCGGCTGTGGGCTC 205218 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || | ||| ||| || || ||||| || | | || || || || || || || Sbjct 205217 GTTGATGACACGGAGAACGTCGAGACCAGCGATCGAACCAGCGTCCTTGGTAGCCTGACG 205158 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 ||| || ||||| |||||||||||||| || | ||| Sbjct 205157 TTGAGAGTCGTTGAAGTAGGCCGGGACGGTGATGAC 205122 Score = 111 bits (122), Expect = 2e-19 Identities = 184/266 (69%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||||||||| || || || || ||||| || ||||| | || | || Sbjct 587602 TCGAAGTCCTCACCACCCAAATGGGTGTCACCAGCGGTAGCCTTGACAGCGAAAACGCCA 587661 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | || ||||| || |||||||| || || || |||||||| || Sbjct 587662 CCAGTGATGGAAAGAAGGGAGACATCGAAAGTACCACCTCCGAGATCGAAAATGAGCACA 587721 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | || || | | || | ||||||||||| ||||| || || || || || || Sbjct 587722 ATCTTCTCCTCCTTGGTCTTGGTGTCGAGACCGTAGGCGATGGCAGCAGCGGTGGGCTCG 587781 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| ||| || || || ||||| | | || || || || || | || Sbjct 587782 TTGATGATACGGAGAACGTCGAGACCGGCAATGGCACCAGCGTCCTTGGTAGCGAGACGC 587841 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGAC 7722 || || ||||| |||||||| ||||| Sbjct 587842 TGAGAGTCGTTGAAGTAGGCTGGGAC 587867 >seq1 Length=2435598 Score = 104 bits (114), Expect = 3e-17 Identities = 295/451 (65%), Gaps = 13/451 (3%) Strand=Plus/Minus Query 105529 GGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATC 105588 ||||| | ||| | ||| | ||||| ||| || || |||||| | ||| || ||| Sbjct 131132 GGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATC 131073 Query 105589 CACATGGCTGAAAAGAGGTCTCGACACCTCG--CCTCTTCATCACCTTGATTCAAACGAA 105646 |||| || | || | || ||| |||| | ||||| | ||| ||||| || | Sbjct 131072 CACAACGCGTAGAATAAATCACGAG--CTCGAACTTCTTCTTTACCGTGATTTTTTCGTA 131015 Query 105647 TTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTT 105706 |||| ||| |||| || |||||||||||||| || | || | |||| || ||| Sbjct 131014 GATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCT- 130956 Query 105707 TACGACGC------CCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACA 105760 | ||| || |||||| ||| |||| ||||||| || || |||| | || Sbjct 130955 --GGTCGCTTGTTACCACCTTGATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCA 130898 Query 105761 TTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTA 105820 | |||| ||||| | || || ||||| ||| || | || || ||||| | Sbjct 130897 TAGGAACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAA 130838 Query 105821 CATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTA 105880 | ||||| || | || ||||| || || ||| ||| ||||| ||| | Sbjct 130837 TGTTGTGAATGTTGAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGA 130778 Query 105881 CTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACA 105940 ||||| || ||||| ||||| ||| ||||| |||| || |||||||| || || | Sbjct 130777 GAGTATCATAGATACCTTCGATGGAATCCTCCTTCATCGCGATGAGGAAACATGACGAAA 130718 Query 105941 TTTGTGGTCTGGGTGTACCAGCATTGAACAG 105971 |||||| |||||||| || ||||| || Sbjct 130717 GTTGTGGGTGAGGTGTACCCGCGTTGAAAAG 130687 >seq4 Length=1188950 Score = 84.2 bits (92), Expect = 3e-11 Identities = 119/167 (71%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 7922 TCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATG 7981 |||| ||||| ||| || | | | ||| || || ||||| ||||||| |||||| Sbjct 1047672 TCCGTAAACTGTCTACCAACCAACCTCTTGGCGTCGAAAACGGTGTTTTCTGGGTTCTGA 1047613 Query 7982 GCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACG 8041 | | |||||||||||| || || |||| || ||||| | || || || || || Sbjct 1047612 GGAGCTTGGTTCTTCGCTGCATCACCGACTAGTCGTTC---TTCTTGAGTGAAGGCTACC 1047556 Query 8042 TACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 | |||||||| |||| || ||||||||||| || || ||||| || Sbjct 1047555 CATGATGGGGTAATTCGGTTTCCTTGGTCGTTGGCGATGATTTCGAC 1047509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132172806360