Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq8 127 5e-24
seq5 120 7e-22
>seq8
Length=1050647
Score = 127 bits (140), Expect = 5e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
||||| || ||||| ||||| || ||||| |||| ||||| | || |||||||| ||
Sbjct 744557 TGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCGAGTTGT 744498
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| ||||| || | | || || || ||||| || ||||| ||||||||||| ||
Sbjct 744497 TTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGAATCTTG 744438
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||| || || || || || || ||| || ||||| || || | || || ||||||
Sbjct 744437 GACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATGGTTTTACCTGTC 744378
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
||||| || ||||| | ||||||
Sbjct 744377 AAAGTCTTGACGAAGATTTGCAT 744355
Score = 111 bits (122), Expect = 3e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022
||||||| | | || || ||||||||||||||||| || || |||||||| || || |
Sbjct 744760 TGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCT 744701
Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082
| || || ||||| || || ||||||||||| || || ||||| || || || || |
Sbjct 744700 GATCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACGTTATCGATCGTATCGG 744641
Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| || || || | || | || || |||||||||||||| || || | |||||||
Sbjct 744640 AAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 744582
Score = 98.7 bits (108), Expect = 2e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022
||||||| | ||||| | || || ||||| || ||||| |||||||| || |||||||
Sbjct 744220 TGTAATCAGAGAGAGTACGACCGTCCTCGAGTTGTTTACCCGCGAAGATGAGACGTTGTT 744161
Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082
| || || || || || || ||||||||||| || ||||||||| || || || || |
Sbjct 744160 GATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTATCGATAGTATCAG 744101
Query 195083 AACTTTCCACTTCAAGGGTAACCGTCT 195109
| ||| ||||| ||||| | ||||
Sbjct 744100 ATGATTCAACTTCGAGGGTGATGGTCT 744074
Score = 84.2 bits (92), Expect = 5e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 194960 TATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTT 195019
|| |||| |||| ||||||| ||||||||||||||||| || |||||||| || ||||
Sbjct 545235 TACTGTAGTCGGAGAGAGTTCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTT 545176
Query 195020 GTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053
|||| || || || || || || ||||| || ||
Sbjct 545175 GTTGATCAGGTGGGATACCCTCCTTGTCCTGGAT 545142
>seq5
Length=1209326
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|||||||| ||||| || || || |||||||| | ||||| || ||||| |||||||||
Sbjct 1116747 TGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTCCTACCATCCTCGAGCTGC 1116806
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || |||||||| | | ||||| || || || || || || ||||| || || ||
Sbjct 1116807 TTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGGATCTTG 1116866
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||| || || |||||||| ||| || || || ||||| | ||||| |||||
Sbjct 1116867 GACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTACCTGT 1116925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480476996593
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |