Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 4e-21
>seq1
Length=2435598
Score = 116 bits (128), Expect = 4e-21
Identities = 264/397 (66%), Gaps = 0/397 (0%)
Strand=Plus/Minus
Query 48151 CTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAG 48210
|||| |||||||| |||| ||||||||||| | ||| || |||| | || ||| | |
Sbjct 131152 CTAATCCAGGACACTCATGTGGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGAC 131093
Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270
||| || | ||| || ||||| | || |||||||| | || || | |||||| |
Sbjct 131092 GCATGAAAAGATCCGGGATCCACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTT 131033
Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330
| || ||| || || || | |||||| | | || || |||||||| || | |
Sbjct 131032 TACCGTGATTTTTTCGTAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGT 130973
Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390
| || || | |||||||||| || ||||| |||||||| | |||| || || ||
Sbjct 130972 AAATGGCAAAAGCACCTGGTCGCTTGTTACCACCTTGATCGACGTATCGAGCGGTTGCGT 130913
Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450
||| ||| | ||| || || ||||| || || || || || || | || |||
Sbjct 130912 CGTAAGCTCGAAGCATAGGAACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAG 130853
Query 48451 TTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510
|| | || | || || ||| | ||| ||||||||||| | || || || |
Sbjct 130852 AACCCTTGGCACGAATGTTGTGAATGTTGAGACCGATACCACCTGCTGTCTTGGAGATCA 130793
Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTAT 48547
||||| ||| || |||||||| || ||||| ||
Sbjct 130792 TGGCACAAGTTTTGAGAGTATCATAGATACCTTCGAT 130756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108244917560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |