Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 116 4e-21 >seq1 Length=2435598 Score = 116 bits (128), Expect = 4e-21 Identities = 264/397 (66%), Gaps = 0/397 (0%) Strand=Plus/Minus Query 48151 CTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAG 48210 |||| |||||||| |||| ||||||||||| | ||| || |||| | || ||| | | Sbjct 131152 CTAATCCAGGACACTCATGTGGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGAC 131093 Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270 ||| || | ||| || ||||| | || |||||||| | || || | |||||| | Sbjct 131092 GCATGAAAAGATCCGGGATCCACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTT 131033 Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330 | || ||| || || || | |||||| | | || || |||||||| || | | Sbjct 131032 TACCGTGATTTTTTCGTAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGT 130973 Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390 | || || | |||||||||| || ||||| |||||||| | |||| || || || Sbjct 130972 AAATGGCAAAAGCACCTGGTCGCTTGTTACCACCTTGATCGACGTATCGAGCGGTTGCGT 130913 Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450 ||| ||| | ||| || || ||||| || || || || || || | || ||| Sbjct 130912 CGTAAGCTCGAAGCATAGGAACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAG 130853 Query 48451 TTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510 || | || | || || ||| | ||| ||||||||||| | || || || | Sbjct 130852 AACCCTTGGCACGAATGTTGTGAATGTTGAGACCGATACCACCTGCTGTCTTGGAGATCA 130793 Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTAT 48547 ||||| ||| || |||||||| || ||||| || Sbjct 130792 TGGCACAAGTTTTGAGAGTATCATAGATACCTTCGAT 130756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108244917560