Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq8 109 4e-18 seq6 100 2e-15 >seq8 Length=1050647 Score = 109 bits (120), Expect = 4e-18 Identities = 160/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314 || ||||| || | |||||| ||| || ||||| || ||||| || | ||||| | Sbjct 744572 AGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGG--ATGTTGTAGTCGGAGAGAGTAC 744515 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||||| |||||||| ||||| ||||| | || |||||||||||||| || |||| Sbjct 744514 GACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTT 744455 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433 | || |||||||| || ||||| || || ||||| | || | | ||||||| Sbjct 744454 CCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATC-GGAAGACTCGACTTCGAGA 744396 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | |||||||| || | ||| || ||||| ||||||||| Sbjct 744395 GTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 744354 >seq6 Length=1164049 Score = 100 bits (110), Expect = 2e-15 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 550322 CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTT 550381 ||||| | || || || |||||| | || || ||| | | || || |||| | Sbjct 168992 CCAGAGGAGATCTCTTCCATGGTTCTCATCAAGATGCGAGAGACCGCAGAGGCTTACCTC 169051 Query 550382 GGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGT 550441 ||| || || | |||||| || | || || ||||| || || || ||||| || ||| Sbjct 169052 GGTGGTGACGTCAAGGATGCCGTCGTCACCGTCCCAGCCTACTTCAACGACTCTCAGCGT 169111 Query 550442 CAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAA 550501 |||||||| || ||||| || || ||||| || ||||| || || || ||||| || Sbjct 169112 CAAGCTACCAAGGATGCCGGTTTGATCGCTGGTCTCAATGTCCTCCGAATCATCAACGAG 169171 Query 550502 CCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || ||||| ||||| | ||||| ||||| ||||| Sbjct 169172 CCAACTGCCGCTGCCATCGCATACGGACTCGATAA 169206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029291822123710