Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 1e-17
>seq1
Length=2435598
Score = 105 bits (116), Expect = 1e-17
Identities = 246/360 (68%), Gaps = 22/360 (6%)
Strand=Plus/Minus
Query 222039 GCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCG--CTGCTCCTC 222096
||||||| || ||||||||||||| ||| | || | ||| | | || || || ||
Sbjct 131092 GCATGAAAAGATCCGGGATCCACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTT 131033
Query 222097 CACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAG 222156
|| ||| ||||| | ||||| | ||| || |||| ||| |||||||| ||||| ||
Sbjct 131032 TAC--CGTGATTTTTTCGTAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAG 130975
Query 222157 ATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAG--- 222213
|| | ||| | ||| || ||||||||||| ||||| ||||| | | | || ||
Sbjct 130974 GTAAATGGCAAAAGCACCTGGTCGCTTGTTACCACCTTGATCGA----CGTATCGAGCGG 130919
Query 222214 -AGCGTTG-AAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTA 222271
|||| | ||| | ||||| | || || | ||||| || ||||| || ||
Sbjct 130918 TTGCGTCGTAAGCT-CGAAGCATAGGAACGATACCGTTCGAGTACCCGTTTGTACCAGCG 130860
Query 222272 ATGTACGCACCGCCGGCCCTCAGGTT---ACTGGCAGACATGCCGATACCACCGGCGTGT 222328
||||| | ||| ||| | | ||| | | | || | ||||||||||| || |||
Sbjct 130859 ATGTAAGAACCCTTGGCACGAATGTTGTGAAT-GTTGAGA--CCGATACCACCTGC-TGT 130804
Query 222329 -TTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTT 222387
|| ||||||||||| || | |||||||| || ||| || || || || ||||||||
Sbjct 130803 CTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGATACCTTCGATGGAATCCTCCTT 130744
Score = 93.3 bits (102), Expect = 8e-14
Identities = 262/399 (66%), Gaps = 24/399 (6%)
Strand=Plus/Minus
Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479
|| || |||||||| ||||||||||||||| | ||||||| | ||||| || |
Sbjct 131787 AGAGCTGCGTGGTAAATGGTCTCAAAGATCTTGAGGTTGAGTTCCCGGGCCTGAGGGCCA 131728
Query 221480 GTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538
||| |||||||| || | |||| | | ||||| || || || || |||| ||| |
Sbjct 131727 TCGAATGGCATACGGAGAGCCATGAATG-CATCGGCGAGACCTTGAACGCCGAGACCAAC 131669
Query 221539 GGGCCTGTGTCTCCTGTTGGAA--GCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596
||| | || | | |||| || |||| ||||| || ||||| || |||||||||||
Sbjct 131668 GGGTCGATGACGCATGTTCGAGTTGCGG--GCTTCCGGAACGGGGTAGTAGTTGACGTCG 131611
Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656
|| | ||||| | |||| |||| ||| || || || || |||||| |
Sbjct 131610 ATGACCTTGTTCAAGTTCTTGGTGACGACCTTGGTAACGTCATGCAACTTCTG------G 131557
Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716
|| | |||||||| ||||| | || ||| |||||| | |||
Sbjct 131556 AAGTCGTACTCGCCG--TTCGTG----------ATGAATGCGGGTAGGGCGAGCGAAGCC 131509
Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776
| ||| || ||||| ||||| ||| | ||| |||||||| ||||| | ||||
Sbjct 131508 AAGTTGCAAACGGCGACCTCATCCGGAGCAGAGAACTCGATGATCTCGGTACACAAGTTG 131449
Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTG 221815
||||||| || || |||| | || || ||||||
Sbjct 131448 GAAGACTTGATCGTTCCGAGGTTCTGTTGGTTGGACTTG 131410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843882765760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |