Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 105 1e-17 >seq1 Length=2435598 Score = 105 bits (116), Expect = 1e-17 Identities = 246/360 (68%), Gaps = 22/360 (6%) Strand=Plus/Minus Query 222039 GCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCG--CTGCTCCTC 222096 ||||||| || ||||||||||||| ||| | || | ||| | | || || || || Sbjct 131092 GCATGAAAAGATCCGGGATCCACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTT 131033 Query 222097 CACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAG 222156 || ||| ||||| | ||||| | ||| || |||| ||| |||||||| ||||| || Sbjct 131032 TAC--CGTGATTTTTTCGTAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAG 130975 Query 222157 ATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAG--- 222213 || | ||| | ||| || ||||||||||| ||||| ||||| | | | || || Sbjct 130974 GTAAATGGCAAAAGCACCTGGTCGCTTGTTACCACCTTGATCGA----CGTATCGAGCGG 130919 Query 222214 -AGCGTTG-AAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTA 222271 |||| | ||| | ||||| | || || | ||||| || ||||| || || Sbjct 130918 TTGCGTCGTAAGCT-CGAAGCATAGGAACGATACCGTTCGAGTACCCGTTTGTACCAGCG 130860 Query 222272 ATGTACGCACCGCCGGCCCTCAGGTT---ACTGGCAGACATGCCGATACCACCGGCGTGT 222328 ||||| | ||| ||| | | ||| | | | || | ||||||||||| || ||| Sbjct 130859 ATGTAAGAACCCTTGGCACGAATGTTGTGAAT-GTTGAGA--CCGATACCACCTGC-TGT 130804 Query 222329 -TTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTT 222387 || ||||||||||| || | |||||||| || ||| || || || || |||||||| Sbjct 130803 CTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGATACCTTCGATGGAATCCTCCTT 130744 Score = 93.3 bits (102), Expect = 8e-14 Identities = 262/399 (66%), Gaps = 24/399 (6%) Strand=Plus/Minus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || || |||||||| ||||||||||||||| | ||||||| | ||||| || | Sbjct 131787 AGAGCTGCGTGGTAAATGGTCTCAAAGATCTTGAGGTTGAGTTCCCGGGCCTGAGGGCCA 131728 Query 221480 GTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 ||| |||||||| || | |||| | | ||||| || || || || |||| ||| | Sbjct 131727 TCGAATGGCATACGGAGAGCCATGAATG-CATCGGCGAGACCTTGAACGCCGAGACCAAC 131669 Query 221539 GGGCCTGTGTCTCCTGTTGGAA--GCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||| | || | | |||| || |||| ||||| || ||||| || ||||||||||| Sbjct 131668 GGGTCGATGACGCATGTTCGAGTTGCGG--GCTTCCGGAACGGGGTAGTAGTTGACGTCG 131611 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 || | ||||| | |||| |||| ||| || || || || |||||| | Sbjct 131610 ATGACCTTGTTCAAGTTCTTGGTGACGACCTTGGTAACGTCATGCAACTTCTG------G 131557 Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716 || | |||||||| ||||| | || ||| |||||| | ||| Sbjct 131556 AAGTCGTACTCGCCG--TTCGTG----------ATGAATGCGGGTAGGGCGAGCGAAGCC 131509 Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776 | ||| || ||||| ||||| ||| | ||| |||||||| ||||| | |||| Sbjct 131508 AAGTTGCAAACGGCGACCTCATCCGGAGCAGAGAACTCGATGATCTCGGTACACAAGTTG 131449 Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTG 221815 ||||||| || || |||| | || || |||||| Sbjct 131448 GAAGACTTGATCGTTCCGAGGTTCTGTTGGTTGGACTTG 131410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843882765760