Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq8 100 2e-15 >seq8 Length=1050647 Score = 100 bits (110), Expect = 2e-15 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 480597 TAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGA 480656 ||||||| | || ||| |||||| || |||||||||||||| |||||||| || ||| Sbjct 744758 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 744699 Query 480657 TCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-T 480715 ||||| ||||| || ||||||||||||||||| ||| || || || ||||| | Sbjct 744698 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACGTTATCGATCGTATCGGAA 744639 Query 480716 GTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | ||| || |||||||| || || | ||| || || || ||||| Sbjct 744638 GACTCTACCTCCAA-CGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTG 744586 Score = 96.9 bits (106), Expect = 2e-14 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 480592 CATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTT 480651 || |||||||| | ||| || ||||| | ||| || ||||| ||||||||||||| Sbjct 743796 CACTATAATCACTCAAAGTCCTACCGTCTTCCAATTGTTTACCAGCGAAAATAAGACGTT 743737 Query 480652 GTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTAT 480711 |||||||||| || || ||||| || ||||||||||| ||||||| || ||||||| Sbjct 743736 GTTGATCAGGTGGGATACCTTCTTTATCTTGAATCTTGGATTTGACATTATCGATAGTAT 743677 Query 480712 C 480712 | Sbjct 743676 C 743676 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| || | |||||||||| || || | || || || | ||||| Sbjct 744576 ACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGT 744517 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||| ||||| || || || ||||| | | || ||||||||||| || || Sbjct 744516 ACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACC 744457 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||||||||||||| || ||| || || ||||| | | | | ||| | Sbjct 744456 TTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGA-CTTCGA 744398 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || |||||||| || | |||||| ||||| ||||| Sbjct 744397 GAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTG 744358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268175811306692