Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 1e-17
>seq1
Length=2435598
Score = 104 bits (114), Expect = 1e-17
Identities = 158/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
||| || | ||| || ||||||| || || |||||||| | |||| | |||||||||
Sbjct 131091 CATGAAAAGATCCGGGATCCACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTT 131032
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
|||||||| ||| |||||| | || || |||| || | ||||||||| || | ||
Sbjct 131031 ACCGTGATTTTTTCGTAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTA 130972
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
|| |||||| |||| || || ||||||||||| ||||||| || ||| | |
Sbjct 130971 AATGGCAAAAGCACCTGGTCGCTTGTTACCACCTTGATCGACGTATCGAGCGGTTGCGTC 130912
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGT 26157
| || || | ||| ||||| | || | || | ||||||||
Sbjct 130911 GTAAGCTCGAAGCATAGGAACGATACCGTTCGAGTACCCGTTTGT 130867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039756369925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |