Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq6 349 5e-91
seq8 181 1e-40
seq5 150 2e-31
seq4 116 5e-21
seq1 107 3e-18
>seq6
Length=1164049
Score = 349 bits (386), Expect = 5e-91
Identities = 833/1251 (67%), Gaps = 10/1251 (1%)
Strand=Plus/Plus
Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691
|| || || || || || ||||| | || |||||| ||||| || || ||| | |
Sbjct 168992 CCAGAGGAGATCTCTTCCATGGTTCTCATCAAGATGCGAGAGACCGCAGAGGCTTACCTC 169051
Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751
||| || || ||||| || || || || || || ||||||| || || || ||
Sbjct 169052 GGTGGTGACGTCAAGGATGCCGTCGTCACCGTCCCAGCCTACTTCAACGACTCTCAGCGT 169111
Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGA 195810
|| || || ||||| || | | || || ||||| || |||| | |||| ||||| ||
Sbjct 169112 CAAGCTACCAAGGATGCCGGTTTGATCGCTGGTCTCAA-TGTCCTCCGAATCATCAACGA 169170
Query 195811 ACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGT 195870
||||| || ||||| || || || || || || ||||| | | || || || ||
Sbjct 169171 GCCAACTGCCGCTGCCATCGCATACGGACTCGATAAGAAGTCCGCAGGTGAGAAGAACGT 169230
Query 195871 ATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGG 195930
| ||||| || | || |||||||| || ||||| || || || | ||| || | ||
Sbjct 169231 TCTCATCTTCGACTTGGGAGGTGGTACTTTCGATGTATCTCTCCTTACTATCGAGGAGGG 169290
Query 195931 TATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGC 195990
||| ||||| || ||||| || || ||||| || ||| | ||||||||||| |||||
Sbjct 169291 TATCTTCGAGGTCAAGGCCACCGCCGGTGACACCCATTTGGGTGGTGAAGACTTCGACAA 169350
Query 195991 ACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTG 196049
||||| || || ||||| | | |||||| | ||||| ||||| ||| ||||
Sbjct 169351 CCGTCTCGTCAACCACTTTGT-TCAGGAGTTCAAGAGGAAGAACAAGAAGGATCTTTCAT 169409
Query 196050 GAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCT 196109
|| || | ||||| ||||| || | || || |||||||||||||| ||||| ||||
Sbjct 169410 CCAACGCTCGTGCTCTCCGTCGTCTCCGAACCGCGTGTGAACGTGCCAAGCGAACCCTCT 169469
Query 196110 CTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATA 196169
|||| | || || || | | |||||||| || | |||||||| || || | || |
Sbjct 169470 CTTCCGCCGCGCAGACCTCGATCGAGATTGACTCCCTCTTTGACGGTATCGATCTTTACA 169529
Query 196170 CAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGG 196229
| | || |||||||| || || || ||| | | || | || | | ||||
Sbjct 169530 CTTCGATCACCCGTGCTCGATTCGAGGAGCTCTGCCAGGACCTCTTCCGATCGACCATGG 169589
Query 196230 AACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTG 196289
| || || || | || || ||| ||||||| || ||| || ||| || || |
Sbjct 169590 ACCCGGTCGAGAAGGTTCTCAAAGACTCAAAGATCGACAAGGCTTCCGTTAGCGAGATCG 169649
Query 196290 TCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCA 196349
|||| || || || || || ||||| || || |||||| || | | || | | |||
Sbjct 169650 TCCTCGTCGGTGGTTCCACTCGTATCCCAAAAATTCAAAAGCTCGTATCCGACATGTTCT 169709
Query 196350 ATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCG 196409
| || |||| |||||||||| |||||||| || || || ||||| || |
Sbjct 169710 CCGGTCGTGAACCAAACCGTTCGATCAACCCCGATGAAGCCGTCGCATACGGTGCTGCTG 169769
Query 196410 TTCAGGCTGCTATTCTCTCAGGTGTTGACA-ATAAT--AACGTCCAAGATCTTCTGCTAC 196466
|||| || ||||| ||| | || ||||| | | || ||| ||||| || | |
Sbjct 169770 TTCAAGCCGCTATCCTCACCGG---TGACACCTCGTCAAAGACCCAGGATCTCCTCTTGC 169826
Query 196467 TTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTA 196526
| || || || || | || ||| | || || || |||||||| ||||| | |
Sbjct 169827 TCGACGTCGCTCCTCTCTCTACCGGTATCGAGACCGCTGGTGGTGTCATGACCCCGCTCA 169886
Query 196527 TTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATA 196586
| | | ||||| || |||| || || ||| | |||| || || || || || |
Sbjct 169887 TCAAGCGAAACACCACCGTTCCTACCAAAAAGTCCGAGATCTTCTCCACCTACTCGGACA 169946
Query 196587 ATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACC 196646
| || |||||||| | || || || || || || ||||| | || | |||||| |
Sbjct 169947 ACCAGCCAGGTGTGCTCATCCAGGTCTACGAGGGTGAACGTGCACGAACCAAGGATTGCA 170006
Query 196647 ATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGA 196706
| || || |||| ||||| | || || |||||| | || || | ||||| || || |
Sbjct 170007 ACCTCCTCGGAAAGTTCGAGCTCACCGGTATTCCACCCGCTCCTCGTGGTGTCCCCCAAA 170066
Query 196707 TTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGG 196766
| | || ||||||||| || || || || || |||||| | || | ||||||
Sbjct 170067 TCGAAGTCACCTTCGATATCGATGCCAACTCTATCCTTAACGTCTCCGCCGCCGACAAGA 170126
Query 196767 CTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGG 196826
| | || || || ||||| || ||||| |||||||| || || || |||||||
Sbjct 170127 CCACCGGTAAGAGTGGCAAGATCACCATCACCAACGACAAGGGTCGTCTCTCAAAGGAGG 170186
Query 196827 AAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877
| || || || ||||| || || || |||||||||| |||||| ||||
Sbjct 170187 AGATCGAGCGCATGGTCGCCGACGCTGAGAAGTACAGGGCAGAAGATGAGG 170237
>seq8
Length=1050647
Score = 181 bits (200), Expect = 1e-40
Identities = 184/239 (77%), Gaps = 2/239 (1%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||||||||| || || || | || || ||||| ||||| ||||| || ||||
Sbjct 744350 GTGGTATGCAAATCTTCGTCAAGACTTTGACAGGTAAAACCATCACTCTCGAAGTCGAGT 744409
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || || || |||||||| | || ||||||||||||| |||||||| || || || |
Sbjct 744410 CTTCCGATACGATCGATAATGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTG 744469
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
||||||| | | ||||| || |||||||| || ||||| || ||||| ||| | || |
Sbjct 744470 ATCAGCAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACT 744529
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093
||||| | |||||||||||||| || || | ||||| | ||||| ||||| |||||
Sbjct 744530 ACAACATCCAAAAGGAGTCTACACTTCATTTGGTTCTCCGACTTCGTGGTGGAATGCAA 744588
Score = 168 bits (186), Expect = 9e-37
Identities = 144/178 (81%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||||||||| ||||| | || || ||||||||||| | ||||| ||||| ||
Sbjct 744583 ATGCAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTCC 744642
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || ||||||||| | ||| ||||||||||||| ||||| || |||||||| ||||||
Sbjct 744643 GATACGATCGATAACGTGAAATCCAAGATTCAAGACAAGGAGGGTATTCCACCTGATCAG 744702
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039
|| || ||||| |||||||| || ||||| |||||||| | || | |||||||||
Sbjct 744703 CAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACATTGTCTGATTACA 744760
Score = 136 bits (150), Expect = 5e-27
Identities = 117/145 (81%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 171895 ACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAA 171954
|| ||||||||||| ||||| || || || || ||||||||| |||| |||||||||||
Sbjct 744076 ACCATCACCCTCGAAGTTGAATCATCTGATACTATCGATAACGTCAAGTCCAAGATTCAA 744135
Query 171955 GATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAA 172014
|| ||||| || || ||||| ||||| ||||| || || || || |||||||| || ||
Sbjct 744136 GACAAGGAGGGTATCCCACCTGATCAACAACGTCTCATCTTCGCGGGTAAACAACTCGAG 744195
Query 172015 GATGGACGTACCCTCGCTGATTACA 172039
|| || ||||| ||| |||||||||
Sbjct 744196 GACGGTCGTACTCTCTCTGATTACA 744220
Score = 114 bits (126), Expect = 2e-20
Identities = 93/113 (82%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 171907 GAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGC 171966
||||| || || || || || |||||||| ||||| |||||||||||||||| |||||
Sbjct 743661 GAGGTCGAATCTTCCGATACTATCGATAATGTCAAATCCAAGATTCAAGATAAAGAAGGT 743720
Query 171967 ATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGG 172019
|| ||||| ||||| ||||| |||||||| ||||||||||| | ||||| ||
Sbjct 743721 ATCCCACCTGATCAACAACGTCTTATTTTCGCTGGTAAACAATTGGAAGACGG 743773
Score = 113 bits (124), Expect = 6e-20
Identities = 100/125 (80%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 171895 ACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAA 171954
|| ||||||||||| || || || ||||| || |||||||| ||||| | |||||||||
Sbjct 743218 ACAATCACCCTCGAAGTCGAATCATCAGATACGATCGATAATGTCAAATCAAAGATTCAA 743277
Query 171955 GATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAA 172014
||||| ||||| |||||||| ||||| || | | ||||||||||| || ||| | ||
Sbjct 743278 GATAAAGAAGGTATTCCACCTGATCAACAGAGGTTGATTTTTGCTGGGAAGCAGTTGGAG 743337
Query 172015 GATGG 172019
|||||
Sbjct 743338 GATGG 743342
>seq5
Length=1209326
Score = 150 bits (166), Expect = 2e-31
Identities = 158/208 (76%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942
||||| || || || |||||||||||||||||||| || ||||| ||||| || ||||
Sbjct 1116928 CTTACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAG 1116869
Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002
||||||| || || ||||| || || ||||| ||||| || | | || || |||||
Sbjct 1116868 TCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGGC 1116809
Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTA 172062
|| ||||| || ||||| | || || | ||||||||| | || ||||||||||||||
Sbjct 1116808 AAGCAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCTT 1116749
Query 172063 CACCTTGTTCTAAGGCTTCGGGGTGGTG 172090
|| | || || | ||||| |||||||
Sbjct 1116748 CATTTGGTCCTCCGTCTTCGTGGTGGTG 1116721
>seq4
Length=1188950
Score = 116 bits (128), Expect = 5e-21
Identities = 191/268 (71%), Gaps = 8/268 (3%)
Strand=Plus/Plus
Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783
||| || |||||| ||| | ||||||||||| || |||||||| | | |||| || ||
Sbjct 1048103 ACCCGCAGACTTCAATGACGCTCAACGACAGGCCACCAAGGACGCAGGTACTATCGCTGG 1048162
Query 195784 TCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842
| | | |||| || |||| |||| || || || || || || || || || ||||| |
Sbjct 1048163 TTTGA-CTGTTCTCCGAATCGTCAACGAGCCTACTGCCGCCGCTATCGCCTACGGTCTCG 1048221
Query 195843 ACAAGAACAAGGA---CGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899
|| |||| | | | || | |||| || | ||| |||||||| ||||||||||
Sbjct 1048222 ACC-GAACCGGAAAATCCGAGTCACAAATC-ATCG-TCTACGATCTCGGAGGTGGTACGT 1048278
Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959
| ||||| || || ||| |||||| | |||| | ||||| || || || || ||||
Sbjct 1048279 TCGATGTGTCTCTCCTCTCTATTGAGGATGGTGTCTTCGAGGTCCTCGCCACCGCCGGTG 1048338
Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987
| || ||||| ||||| ||||| || ||
Sbjct 1048339 ACACCCATCTCGGTGGAGAAGACTTTGA 1048366
>seq1
Length=2435598
Score = 107 bits (118), Expect = 3e-18
Identities = 267/405 (66%), Gaps = 9/405 (2%)
Strand=Plus/Plus
Query 78068 TTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAG 78127
|| || || ||||| || | ||||| | || || |||||||| | || | ||||||
Sbjct 130690 TTCAACGCGGGTACACCTCACCCACAACTTTCGTCATGTTTCCTCATCGCGATGAAGGAG 130749
Query 78128 GACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCT 78187
|| || || | ||||| || | ||||||| | ||||| ||| || ||| ||
Sbjct 130750 GATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCCAAGACAGCA 130809
Query 78188 GGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACT 78247
|||||||| ||||| | |||||| | ||||||| || || || || ||
Sbjct 130810 GGTGGTATCGGTCTCAACATTCACAACATTCGTGCCAAGGGTTCTTACATCGCTGGTACA 130869
Query 78248 AATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTAT 78307
|| || | || | || || ||||||||||| | | | | | || || || || ||
Sbjct 130870 AACGGGTACTCGAACGGTATCGTTCCTATGCTTCGAGCTTACGACGCAACCGCTCGATAC 130929
Query 78308 GTCAACCAAGCGGGTCGTAGGAAGGGGTCA------TTCGCTATGTACCTTGAACCTTGG 78361
||| | |||| || ||| ||| | || || || || ||||| || || |||
Sbjct 130930 GTCGATCAAG---GTGGTAACAAGCGACCAGGTGCTTTTGCCATTTACCTCGAGCCATGG 130986
Query 78362 CACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGA 78421
|||||||| || | || ||| | || || || || || ||| | || |||| ||||
Sbjct 130987 CACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCACGGTAAAGAAGAAGTTCGA 131046
Query 78422 TGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATG 78466
| ||||||||| || ||||||| ||||||||||| |||
Sbjct 131047 GCTCGTGATTTATTCTACGCGTTGTGGATCCCGGATCTTTTCATG 131091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657861750360880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |