Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq8 150 3e-31
seq5 89.7 9e-13
>seq8
Length=1050647
Score = 150 bits (166), Expect = 3e-31
Identities = 175/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| || ||||| | | ||| || |||| ||| | ||||| ||| || || ||
Sbjct 744590 ATTTGCATTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTG 744531
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||||| | || | | || || | |||||| ||||| ||||| || ||||| |||
Sbjct 744530 TAGTCGGAGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGA 744471
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|||||||| || ||||| || ||||| || |||| |||| ||| || |||||||||
Sbjct 744470 TCAGGAGGGATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAA 744411
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| ||||| || ||||||||||| | || || || || ||||||||
Sbjct 744410 GACTCGACTTCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355
Score = 98.7 bits (108), Expect = 2e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
|| ||||| ||||| || | | ||| |||||||| || || || || || ||||| ||
Sbjct 744728 TGCTTTCCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATACCCTCCTTGTCTTGAATC 744669
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|||| ||| | || || |||||||||||||| || || | || |||||||| |||
Sbjct 744668 TTGGATTTCACGTTATCGATCGTATCGGAAGACTCTACCTCCAACGTGATAGTTTTCCCT 744609
Query 193335 GTTAGCGTTTTTACAAATATTTGCATT 193361
|| | ||||| ||||| |||||||||
Sbjct 744608 GTCAAAGTTTTGACAAAGATTTGCATT 744582
Score = 87.8 bits (96), Expect = 3e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || || || || || |||||||| || |||||||||||||| || || ||||||||
Sbjct 743340 ATCCTCCAACTGCTTCCCAGCAAAAATCAACCTCTGTTGATCAGGTGGAATACCTTCTTT 743281
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
|||||| || || | ||| | ||| || ||||| || || || ||||| || || ||
Sbjct 743280 ATCTTGAATCTTTGATTTGACATTATCGATCGTATCTGATGATTCGACTTCGAGGGTGAT 743221
Query 193325 AGT 193327
||
Sbjct 743220 TGT 743218
Score = 87.8 bits (96), Expect = 3e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || |||||||| || || ||||| | | ||||||||||| || || |||||||||
Sbjct 743770 TCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCAGGTGGGATACCTTCTTTA 743711
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316
||||| || |||| ||| | ||| |||||||||||||| || || |||
Sbjct 743710 TCTTGAATCTTGGATTTGACATTATCGATAGTATCGGAAGATTCGACCTCT 743660
>seq5
Length=1209326
Score = 89.7 bits (98), Expect = 9e-13
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| | | || || |||| ||| | |||| ||| || || || || || ||
Sbjct 1116722 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 1116781
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| || ||| ||| || | || || || || || || || |||||||||||||| ||
Sbjct 1116782 TAGAGTCCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 1116841
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| || || || || || || |||| || | ||| || || ||||||||||||||
Sbjct 1116842 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1116901
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAG 193339
|| || || || || |||||||| ||
Sbjct 1116902 CTCGAGGGTGATGGTCTTACCTGTAAG 1116928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899653511591280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |