Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq8 150 3e-31 seq5 89.7 9e-13 >seq8 Length=1050647 Score = 150 bits (166), Expect = 3e-31 Identities = 175/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| | | ||| || |||| ||| | ||||| ||| || || || Sbjct 744590 ATTTGCATTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTG 744531 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||| | || | | || || | |||||| ||||| ||||| || ||||| ||| Sbjct 744530 TAGTCGGAGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGA 744471 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || ||||| || ||||| || |||| |||| ||| || ||||||||| Sbjct 744470 TCAGGAGGGATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAA 744411 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| ||||| ||||| || ||||||||||| | || || || || |||||||| Sbjct 744410 GACTCGACTTCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || ||||| ||||| || | | ||| |||||||| || || || || || ||||| || Sbjct 744728 TGCTTTCCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATACCCTCCTTGTCTTGAATC 744669 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| ||| | || || |||||||||||||| || || | || |||||||| ||| Sbjct 744668 TTGGATTTCACGTTATCGATCGTATCGGAAGACTCTACCTCCAACGTGATAGTTTTCCCT 744609 Query 193335 GTTAGCGTTTTTACAAATATTTGCATT 193361 || | ||||| ||||| ||||||||| Sbjct 744608 GTCAAAGTTTTGACAAAGATTTGCATT 744582 Score = 87.8 bits (96), Expect = 3e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || || || || || |||||||| || |||||||||||||| || || |||||||| Sbjct 743340 ATCCTCCAACTGCTTCCCAGCAAAAATCAACCTCTGTTGATCAGGTGGAATACCTTCTTT 743281 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| || || | ||| | ||| || ||||| || || || ||||| || || || Sbjct 743280 ATCTTGAATCTTTGATTTGACATTATCGATCGTATCTGATGATTCGACTTCGAGGGTGAT 743221 Query 193325 AGT 193327 || Sbjct 743220 TGT 743218 Score = 87.8 bits (96), Expect = 3e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || |||||||| || || ||||| | | ||||||||||| || || ||||||||| Sbjct 743770 TCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCAGGTGGGATACCTTCTTTA 743711 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316 ||||| || |||| ||| | ||| |||||||||||||| || || ||| Sbjct 743710 TCTTGAATCTTGGATTTGACATTATCGATAGTATCGGAAGATTCGACCTCT 743660 >seq5 Length=1209326 Score = 89.7 bits (98), Expect = 9e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||| | | || || |||| ||| | |||| ||| || || || || || || Sbjct 1116722 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 1116781 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || || ||| ||| || | || || || || || || || |||||||||||||| || Sbjct 1116782 TAGAGTCCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 1116841 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || || || || || || || |||| || | ||| || || |||||||||||||| Sbjct 1116842 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1116901 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAG 193339 || || || || || |||||||| || Sbjct 1116902 CTCGAGGGTGATGGTCTTACCTGTAAG 1116928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899653511591280