Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq8 113 9e-20
seq5 93.3 8e-14
>seq8
Length=1050647
Score = 113 bits (124), Expect = 9e-20
Identities = 112/145 (77%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
|||||||| ||||| | |||| ||||| || || |||||||| || || |||||||
Sbjct 743362 TATAATCACTCAATGTCCTCCCATCCTCCAACTGCTTCCCAGCAAAAATCAACCTCTGTT 743303
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
|||||||||| || |||||||||||||| || || ||| |||||| || | |||||
Sbjct 743302 GATCAGGTGGAATACCTTCTTTATCTTGAATCTTTGATTTGACATTATCGATCGTATCTG 743243
Query 192479 ACGATTCTACTTCTAGAGTAATGGT 192503
| ||||| ||||| || || || ||
Sbjct 743242 ATGATTCGACTTCGAGGGTGATTGT 743218
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | ||| || | || ||||| | |||| ||| || ||| || || ||
Sbjct 744584 ATTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCG 744525
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || | || || | ||||||||| || || || || ||||| ||||||||
Sbjct 744524 GAGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGA 744465
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || ||||||||| || | ||| || || ||
Sbjct 744464 GGGATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCG 744405
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| ||||| ||||||||||| || || || || | || || |||||
Sbjct 744404 ACTTCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355
Score = 95.1 bits (104), Expect = 2e-14
Identities = 127/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 192361 TAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGA 192420
|||||||| ||||| | |||| || | || || ||||||||||| | | ||| |||
Sbjct 744758 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 744699
Query 192421 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGAC 192480
|||||||| || || || || ||||| || || ||| || ||| || | ||| ||
Sbjct 744698 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACGTTATCGATCGTATCGGAA 744639
Query 192481 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| ||||| || | || || ||||| || || || ||||| | ||| || ||||||
Sbjct 744638 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 744582
Score = 93.3 bits (102), Expect = 8e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
|||||||| || || | | || ||||||||||||||||| || || | | ||||
Sbjct 743793 TATAATCACTCAAAGTCCTACCGTCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTT 743734
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
|||||||||| || |||||||||||||| || || ||| |||||| |||| ||| |
Sbjct 743733 GATCAGGTGGGATACCTTCTTTATCTTGAATCTTGGATTTGACATTATCGATAGTATCGG 743674
Query 192479 ACGATTCTACTTCT 192492
| ||||| || |||
Sbjct 743673 AAGATTCGACCTCT 743660
>seq5
Length=1209326
Score = 93.3 bits (102), Expect = 8e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | |||||| | || ||||| | ||||| ||| || ||| || ||||| ||
Sbjct 1116722 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 1116781
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| || | |||| || | || || ||||| ||||| || |||||||||||||||||
Sbjct 1116782 TAGAGTCCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 1116841
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| || || || || || || || || ||||| || | || || || || ||
Sbjct 1116842 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1116901
Query 192489 TTCTAGAGTAATGGTTTTACCAGT 192512
|| || || ||||| ||||| ||
Sbjct 1116902 CTCGAGGGTGATGGTCTTACCTGT 1116925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479003521650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |