Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq8 127 4e-24 >seq8 Length=1050647 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||||| | || ||||| | |||| ||| || || || || || Sbjct 744584 ATTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCG 744525 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || |||| || | ||||||||| || ||||| || ||||| || ||||| Sbjct 744524 GAGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGA 744465 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || ||||||||| || ||||| || || || Sbjct 744464 GGGATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCG 744405 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| ||||||||||| || || || || | ||| || ||||| Sbjct 744404 ACTTCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355 Score = 107 bits (118), Expect = 3e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || || ||||||||||| || |||||||| |||||||| || ||||||||| Sbjct 743339 TCCTCCAACTGCTTCCCAGCAAAAATCAACCTCTGTTGATCAGGTGGAATACCTTCTTTA 743280 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || || ||| |||||| || |||||||| ||||| ||||| || || || Sbjct 743279 TCTTGAATCTTTGATTTGACATTATCGATCGTATCTGATGATTCGACTTCGAGGGTGATT 743220 Query 172035 GT 172036 || Sbjct 743219 GT 743218 Score = 100 bits (110), Expect = 5e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972 |||| ||||||||||||||||| ||||| | | ||||| |||||||| || ||||||| Sbjct 743772 CGTCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCAGGTGGGATACCTTCTT 743713 Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCT 172025 ||||||| || || ||| |||||| |||||||| || ||||| || ||| Sbjct 743712 TATCTTGAATCTTGGATTTGACATTATCGATAGTATCGGAAGATTCGACCTCT 743660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135106178200