Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 4e-13
seq14 84.2 6e-11
>seq1
Length=2435598
Score = 91.5 bits (100), Expect = 4e-13
Identities = 174/253 (69%), Gaps = 4/253 (2%)
Strand=Plus/Minus
Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613
||||| | | ||| | ||| ||||| ||| | || ||||||||||| || || |||
Sbjct 478731 TCATAGCACACCATGACGTCCTCCATCGCCTTCACCAATCGACGCTGAATGTATCCTGTT 478672
Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673
|| || || || || |||||||| | ||| |||||||| |||| || ||||||||
Sbjct 478671 TCAGCGGTCTTGACTGCAGTATCAATCAAACCTTCACGACCAGCCATGGCGTGGAAGAAG 478612
Query 302674 AGCTCTTCCG--GTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731
| ||||| | ||| | || | ||| | ||| |||||||||| |||| || || |
Sbjct 478611 AACTCTTGTGGAGTC-AAACCTCGCAA-GTACGAGTTCTCAACGAAGCCACCAGCTTCAG 478554
Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791
| || || ||| | || || |||| | || || || | ||| | |||||||
Sbjct 478553 GTCCATAATCATCCTTCGAGAAATGGGGCAATGACCGGTGCTTGAACCCGAACGGGATAC 478494
Query 302792 GCTTTCCATCAAC 302804
||||||| || ||
Sbjct 478493 GCTTTCCTTCCAC 478481
>seq14
Length=870626
Score = 84.2 bits (92), Expect = 6e-11
Identities = 108/146 (74%), Gaps = 6/146 (4%)
Strand=Plus/Plus
Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904
||||||||||| |||||||| || || |||||||||| ||||| | || ||
Sbjct 624896 ATAGTCATACGCGACGGAATAGCGTGTGGGTTGATGATGAGATCGGGCACAATACCCTCC 624955
Query 251905 GCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTTTGTCCG 251961
|||||||| ||||| ||| |||| | ||| || |||||| ||| ||||| ||||||
Sbjct 624956 GCAGTGAAAGGCATGTCC---TCCTGACGATATGTGATTCCAACAGTACCCTTCTGTCCG 625012
Query 251962 TGACGAGAACTGAACTTATCACCAAT 251987
||||| || ||||| || |||||
Sbjct 625013 TGACGGGACGCAAACTTGTCTCCAAT 625038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816110244623
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |