Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 4e-13 seq14 84.2 6e-11 >seq1 Length=2435598 Score = 91.5 bits (100), Expect = 4e-13 Identities = 174/253 (69%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613 ||||| | | ||| | ||| ||||| ||| | || ||||||||||| || || ||| Sbjct 478731 TCATAGCACACCATGACGTCCTCCATCGCCTTCACCAATCGACGCTGAATGTATCCTGTT 478672 Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673 || || || || || |||||||| | ||| |||||||| |||| || |||||||| Sbjct 478671 TCAGCGGTCTTGACTGCAGTATCAATCAAACCTTCACGACCAGCCATGGCGTGGAAGAAG 478612 Query 302674 AGCTCTTCCG--GTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731 | ||||| | ||| | || | ||| | ||| |||||||||| |||| || || | Sbjct 478611 AACTCTTGTGGAGTC-AAACCTCGCAA-GTACGAGTTCTCAACGAAGCCACCAGCTTCAG 478554 Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791 | || || ||| | || || |||| | || || || | ||| | ||||||| Sbjct 478553 GTCCATAATCATCCTTCGAGAAATGGGGCAATGACCGGTGCTTGAACCCGAACGGGATAC 478494 Query 302792 GCTTTCCATCAAC 302804 ||||||| || || Sbjct 478493 GCTTTCCTTCCAC 478481 >seq14 Length=870626 Score = 84.2 bits (92), Expect = 6e-11 Identities = 108/146 (74%), Gaps = 6/146 (4%) Strand=Plus/Plus Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904 ||||||||||| |||||||| || || |||||||||| ||||| | || || Sbjct 624896 ATAGTCATACGCGACGGAATAGCGTGTGGGTTGATGATGAGATCGGGCACAATACCCTCC 624955 Query 251905 GCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTTTGTCCG 251961 |||||||| ||||| ||| |||| | ||| || |||||| ||| ||||| |||||| Sbjct 624956 GCAGTGAAAGGCATGTCC---TCCTGACGATATGTGATTCCAACAGTACCCTTCTGTCCG 625012 Query 251962 TGACGAGAACTGAACTTATCACCAAT 251987 ||||| || ||||| || ||||| Sbjct 625013 TGACGGGACGCAAACTTGTCTCCAAT 625038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816110244623