Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq9 82.4 1e-10
>seq9
Length=1075742
Score = 82.4 bits (90), Expect = 1e-10
Identities = 188/278 (68%), Gaps = 4/278 (1%)
Strand=Plus/Minus
Query 172349 AACTATACCATTGCTTACTACaaaaaaaaTTGTATATAC-TAATATCCTCAAAGAACTTT 172407
|||| | ||||| || ||||| |||| | || | | ||| | | | | ||||| |
Sbjct 472048 AACTTTCCCATTACTCACTACTAAAAGAGTTTTTT-TACGTGGTGTTGTTGAAGAATTAC 471990
Query 172408 TATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTT 172467
| ||| ||||| |||||||| ||| || |||| ||| |||| || |||
Sbjct 471989 TTTGGTTTATTCGGGGTTCAACAGATGGGAATTTATTATCGGATTTAGGAATTGGGATTT 471930
Query 172468 GGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAAG 172527
|| ||| ||||| | | || | ||| ||| | || || | || |||| | |||
Sbjct 471929 GGGATGGGAATGGAAGTAGAGAGTATTTGGATAAAGTTGGATTGAAAGATAGAAGACAAG 471870
Query 172528 GTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGAC- 172586
||||| | || || ||||||||||||||||||||||| || || ||||| |||
Sbjct 471869 GTGATCTTGGACCGGTTTATGGATTTCAATGGAGACATTTCGGAGCAGAATAT-GGGACT 471811
Query 172587 TGTGATACAGATTACACAGGACAAGGAGTGGACCAATT 172624
|||||| ||||| | ||| |||| ||||| |||||
Sbjct 471810 TGTGATGATGATTATAGAGGGAAAGGGGTGGATCAATT 471773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632488975416520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |