Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq9 82.4 1e-10 >seq9 Length=1075742 Score = 82.4 bits (90), Expect = 1e-10 Identities = 188/278 (68%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 172349 AACTATACCATTGCTTACTACaaaaaaaaTTGTATATAC-TAATATCCTCAAAGAACTTT 172407 |||| | ||||| || ||||| |||| | || | | ||| | | | | ||||| | Sbjct 472048 AACTTTCCCATTACTCACTACTAAAAGAGTTTTTT-TACGTGGTGTTGTTGAAGAATTAC 471990 Query 172408 TATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTT 172467 | ||| ||||| |||||||| ||| || |||| ||| |||| || ||| Sbjct 471989 TTTGGTTTATTCGGGGTTCAACAGATGGGAATTTATTATCGGATTTAGGAATTGGGATTT 471930 Query 172468 GGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAAG 172527 || ||| ||||| | | || | ||| ||| | || || | || |||| | ||| Sbjct 471929 GGGATGGGAATGGAAGTAGAGAGTATTTGGATAAAGTTGGATTGAAAGATAGAAGACAAG 471870 Query 172528 GTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGAC- 172586 ||||| | || || ||||||||||||||||||||||| || || ||||| ||| Sbjct 471869 GTGATCTTGGACCGGTTTATGGATTTCAATGGAGACATTTCGGAGCAGAATAT-GGGACT 471811 Query 172587 TGTGATACAGATTACACAGGACAAGGAGTGGACCAATT 172624 |||||| ||||| | ||| |||| ||||| ||||| Sbjct 471810 TGTGATGATGATTATAGAGGGAAAGGGGTGGATCAATT 471773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632488975416520