Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq6 113 3e-19 >seq6 Length=1164049 Score = 113 bits (124), Expect = 3e-19 Identities = 672/1064 (63%), Gaps = 12/1064 (1%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 || || ||||| | || ||||| ||| |||||||| | ||| || |||||||| ||| Sbjct 170124 TTGTCGGCGGCGGAGACGTTAAGGATAGAGTTGGCATCGATATCGAAGGTGACTTCGATT 170065 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 || ||||| || | |||| ||||| || || | | || |||| || || Sbjct 170064 TGGGGGACACCACGAGGAGCGGGTGGAATACCGGTGAGCTCGAACTTTCCGAGGAGGTTG 170005 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 ||| || || | |||||||||||| | | ||||| || | | || || Sbjct 170004 CAATCCTTGGTTCGTGCACGTTCACCCTCGTAGACCTGGATGAGCACACCTGGCTGGTTG 169945 Query 281597 TCTGAATAAGTTGTAAATACTCT-GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 281655 || || || || | || | ||| ||| ||||| ||||| || ||||||| | || Sbjct 169944 TCCGAGTAGGTGGAGAAGA-TCTCGGACTTTTTGGTAGGAACGGTGGTGTTTCGCTTGAT 169886 Query 281656 AATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 281715 | |||||| | ||||||||| || || | ||| ||| ||||||| ||| || | Sbjct 169885 GAGCGGGGTCATGACACCACCAGCGGTCTCGATACCGGTAGAGAGAGGAGCGACGTCGAG 169826 Query 281716 TAGGACAATATTTTGAAGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAG 281774 | || | || || || ||| | || | | ||| || ||||| ||||||| || Sbjct 169825 CAAGAGGAGATCCTGG-GTCTTTGACGAGGTGTCACCGGTGAGGATAGCGGCTTGAACAG 169767 Query 281775 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 281834 ||||||| ||||| || |||||||| || || | | ||| ||| ||| || Sbjct 169766 CAGCACCGTATGCGACGGCTTCATCGGGGTTGATCGAACGGTTTGGTTCACGACCGGAGA 169707 Query 281835 AAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 281894 | | | || | || | | | || || ||||||| || || || || | || | Sbjct 169706 ACATGTCGGATACGAGCTTTTGAATTTTTGGGATACGAGTGGAACCACCGACGAGGACGA 169647 Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTTCA 281953 | || || | || || | ||||| || | ||| || || || |||| || Sbjct 169646 TCTCGCTAACGGAAGCCTTGTCGATCTTTGAGTCTTTGAGAACCTTCTCGACCGGGTCCA 169587 Query 281954 AGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 282013 | | | || || | ||| || || || |||||| ||| | || || || Sbjct 169586 TGGTC-GATCGGAAGAGGTCCTGGCAGAGCTCCTCGAATCGAGCACGGGT--GATCGAAG 169530 Query 282014 T-TATA-ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 282071 | || | ||| || || || || | || |||| || |||| || || | | |||| Sbjct 169529 TGTAAAGATCGATACCGTCAAAGAGGGAGTCAATCTCGATCGAGGTCTGCGCGGCGGAAG 169470 Query 282072 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT 282131 | || | || || ||||||||||| || || | || | || | || || | | Sbjct 169469 AGAGGGTTCGCTTGGCACGTTCACACGCGGTTCGGAGACGACGGAGAGCACGAGC-GTTG 169411 Query 282132 GATTCAA-ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA 282190 ||| || ||| | || | || |||||||| || | |||| | | || ||||| Sbjct 169410 GATGAAAGATCCTTCTTGTTCTTCCTCTTGAACTCCTGAACAAAGTGGTTGACGAGACGG 169351 Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || || || |||||||| ||||| | || | || | || || | || | ||| | Sbjct 169350 TTGTCGAAGTCTTCACCACCCAAATGGGTGTCACCGGCGGTGGCCTTGACCTCGAAGATA 169291 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || || || | || | |||| ||||| || ||||| |||| || || || || Sbjct 169290 CCCTCCTCGATAGTAAGGAGAGATACATCGAAAGTACCACCTCCCAAGTCGAAGATGAGA 169231 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 || ||| | || | || ||||| || || || || | ||||| |||||||| Sbjct 169230 ACGTTCTTCTCACCTGCGGACTTCTTATCGAGTCCGTATGCGATGGCAGCGGCAGTTGGC 169171 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 || || || |||| | ||||| |||||||| || || ||||| || || ||||| Sbjct 169170 TCGTTGATGATTCGGAGGACATTGAGACCAGCGATCAAACCGGCATCCTTGGTAGCTTGA 169111 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 282474 | || || ||||| || || || || || || | |||||||| Sbjct 169110 CGCTGAGAGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCATC 169067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740626521433854