Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq8 149 1e-30 >seq8 Length=1050647 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| || || || ||||| || || || || || || || || ||| | | |||| Sbjct 744569 CGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCG 744510 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| |||||||| || || || || | || || ||||| ||||| || |||||||| Sbjct 744509 TCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTG 744450 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||| | |||||||| || |||||||| || || ||||| | ||| || Sbjct 744449 TCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATG 744390 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || |||||||| ||||| || || || ||||| Sbjct 744389 GTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355 Score = 125 bits (138), Expect = 1e-23 Identities = 134/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 82635 TAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGA 82694 |||||||| | | || || ||||| || || |||||||||||||| || | || ||| Sbjct 744758 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 744699 Query 82695 TCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTA 82754 || || || || || ||||| ||||||||||| | ||| || || || |||||||| | Sbjct 744698 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACGTTATCGATCGTATCGGAA 744639 Query 82755 GGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | ||||| ||||| || || || || |||||||| || || ||||| || |||||| Sbjct 744638 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 744582 Score = 100 bits (110), Expect = 6e-16 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 82633 TATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTT 82692 |||||||| | | | ||||||||||| | |||||| ||||| || || || | ||||| Sbjct 743793 TATAATCACTCAAAGTCCTACCGTCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTT 743734 Query 82693 GATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750 |||| || || || ||||| |||||||||||||| | ||| ||||| || || ||||| Sbjct 743733 GATCAGGTGGGATACCTTCTTTATCTTGAATCTTGGATTTGACATTATCGATAGTATC 743676 Score = 100 bits (110), Expect = 6e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 82635 TAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGA 82694 |||||||| ||| | | |||||| || |||||||| || || ||||| || | ||||||| Sbjct 744218 TAATCAGAGAGAGTACGACCGTCCTCGAGTTGTTTACCCGCGAAGATGAGACGTTGTTGA 744159 Query 82695 TCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTA 82754 || || || || || ||||| ||||||||||| | || || || || || |||||| Sbjct 744158 TCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTATCGATAGTATCAGAT 744099 Query 82755 GGTTCTACTTCCAAAGTTATCGTCT 82779 | ||| ||||| | || || |||| Sbjct 744098 GATTCAACTTCGAGGGTGATGGTCT 744074 Score = 86.0 bits (94), Expect = 1e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724 || || |||||||| || | || |||||||| || || || ||||| |||||||||||| Sbjct 743330 TGCTTCCCAGCAAAAATCAACCTCTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATC 743271 Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCT 82779 |||| ||| ||||| || |||||||| | ||| ||||| | || || |||| Sbjct 743270 TTTGATTTGACATTATCGATCGTATCTGATGATTCGACTTCGAGGGTGATTGTCT 743216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826206206781