Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq8 149 1e-30
>seq8
Length=1050647
Score = 149 bits (164), Expect = 1e-30
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| || || || ||||| || || || || || || || || ||| | | ||||
Sbjct 744569 CGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCG 744510
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| |||||||| || || || || | || || ||||| ||||| || ||||||||
Sbjct 744509 TCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTG 744450
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||||||||| | |||||||| || |||||||| || || ||||| | ||| ||
Sbjct 744449 TCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATG 744390
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || |||||||| ||||| || || || |||||
Sbjct 744389 GTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355
Score = 125 bits (138), Expect = 1e-23
Identities = 134/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 82635 TAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGA 82694
|||||||| | | || || ||||| || || |||||||||||||| || | || |||
Sbjct 744758 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 744699
Query 82695 TCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTA 82754
|| || || || || ||||| ||||||||||| | ||| || || || |||||||| |
Sbjct 744698 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACGTTATCGATCGTATCGGAA 744639
Query 82755 GGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
| ||||| ||||| || || || || |||||||| || || ||||| || ||||||
Sbjct 744638 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 744582
Score = 100 bits (110), Expect = 6e-16
Identities = 93/118 (79%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 82633 TATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTT 82692
|||||||| | | | ||||||||||| | |||||| ||||| || || || | |||||
Sbjct 743793 TATAATCACTCAAAGTCCTACCGTCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTT 743734
Query 82693 GATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750
|||| || || || ||||| |||||||||||||| | ||| ||||| || || |||||
Sbjct 743733 GATCAGGTGGGATACCTTCTTTATCTTGAATCTTGGATTTGACATTATCGATAGTATC 743676
Score = 100 bits (110), Expect = 6e-16
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 82635 TAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGA 82694
|||||||| ||| | | |||||| || |||||||| || || ||||| || | |||||||
Sbjct 744218 TAATCAGAGAGAGTACGACCGTCCTCGAGTTGTTTACCCGCGAAGATGAGACGTTGTTGA 744159
Query 82695 TCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTA 82754
|| || || || || ||||| ||||||||||| | || || || || || ||||||
Sbjct 744158 TCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTATCGATAGTATCAGAT 744099
Query 82755 GGTTCTACTTCCAAAGTTATCGTCT 82779
| ||| ||||| | || || ||||
Sbjct 744098 GATTCAACTTCGAGGGTGATGGTCT 744074
Score = 86.0 bits (94), Expect = 1e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724
|| || |||||||| || | || |||||||| || || || ||||| ||||||||||||
Sbjct 743330 TGCTTCCCAGCAAAAATCAACCTCTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATC 743271
Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCT 82779
|||| ||| ||||| || |||||||| | ||| ||||| | || || ||||
Sbjct 743270 TTTGATTTGACATTATCGATCGTATCTGATGATTCGACTTCGAGGGTGATTGTCT 743216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826206206781
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |