Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq8 100 3e-16 seq1 95.1 1e-14 seq5 91.5 1e-13 >seq8 Length=1050647 Score = 100 bits (110), Expect = 3e-16 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | || ||||| || || || ||||| ||| | || |||| ||| |||| Sbjct 744560 AAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGT--ACGACCGTCTTCGA 744503 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| |||| | || |||||| || |||||||| ||||||||||| | Sbjct 744502 GTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGAA 744443 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||| | | || | ||| |||| | ||| || |||| |||| |||||| | Sbjct 744442 TCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATGGTTTTAC 744383 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| ||| || ||||| || ||||| Sbjct 744382 CTGTCAAAGTCTTGACGAAGATTTGCAT 744355 >seq1 Length=2435598 Score = 95.1 bits (104), Expect = 1e-14 Identities = 429/672 (64%), Gaps = 6/672 (1%) Strand=Plus/Minus Query 148263 ACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCA 148322 || || || ||||| || |||||||| || || ||| | |||||| || | || || Sbjct 132078 ACGACTTGGAACTCTCCAGCGAGCACACGACGAGTATAGATGTTGCTGGTGTAAGGCTCG 132019 Query 148323 AACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGC 148382 || |||| || |||| ||||| | |||| || || ||||| ||| ||||| Sbjct 132018 AAGCACTCATTCCATCCCAGGATCTGAGACGTCGACGCGGTAGGCATCGGCGCGACCAGG 131959 Query 148383 AGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGC 148442 || ||||| | || |||| | || || ||| ||| |||| || |||||||||||| Sbjct 131958 AGGGAGTTTCTCAGACCGTGTTTGGCGATGTTGGCCTTGAGAGTCGACCAGTCCCAGAGT 131899 Query 148443 GGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCC 148502 | | ||| || | ||||| |||| | ||||| |||| ||| || || || Sbjct 131898 GAGGTCGGGGTAATACCCCACAGGTCGAATTGCAGCCTGCCCTCGCTGGCAGGAGATCCT 131839 Query 148503 TCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCG 148562 ||| | ||| | || | | | || || ||||| | || || || || Sbjct 131838 GGGTAAGTCAGGTAGTGACCCTCAATCTCAGCAAGCTCGCAAGAAGATTCAAGAGCTGCG 131779 Query 148563 TAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGC 148622 | |||||| ||||| || | |||||| | ||| || ||| | ||| Sbjct 131778 TGGTAAATGGTCTCAAAGATCTTGAGGTTGAGTTCCCGGGCCTGAGGGCCATCGAATGGC 131719 Query 148623 ATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGT 148682 ||||| || || || || ||||| || || || ||||| | |||| ||| || || Sbjct 131718 ATACGGAGAGCCATGAATGCATCGGCGAGACCTTGAACGCCGAGACCAACGGGTCGATGA 131659 Query 148683 TTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTG-T 148740 ||||| ||| ||| || || || | || |||| |||| |||||||| |||| | Sbjct 131658 CGCATGTTCGAGTTGCGGGC-TTCCGGAACGGGGTAGTAGTTGACGTCGATGACCTTGTT 131600 Query 148741 CAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCAT 148800 |||| || || ||||| |||| ||| | | || ||||||| | | | Sbjct 131599 CAAG-TTCTTGGTGACGACCTTGGTAACGTCATGCAACTTCTGGAAGTCGTACTCGCCGT 131541 Query 148801 CTACGATGCAT-CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGG 148859 |||| || ||| | | ||||| || || | ||||| ||||| ||||||||| Sbjct 131540 TCGTGATGAATGCGGGT-AGGGCGAGCGAAGCCAAGTTGCAAACGGCGACCTCATCCGGA 131482 Query 148860 GCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTT 148919 || | |||| | |||||||| |||| ||| | |||||| || | ||||| | Sbjct 131481 GCAGAGAACTCGATGATCTCGGTACACAAGTTGGAAGACTTGATCGTTCCGAGGTTCTGT 131422 Query 148920 TGATTGCTCTTG 148931 || ||| |||| Sbjct 131421 TGGTTGGACTTG 131410 >seq5 Length=1209326 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/188 (71%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512 ||||| | || ||||| ||||| || |||||||| | || | | | | ||||||| Sbjct 1116744 AAATGAAGAGTAGACTCCTTCTGGATGTTGTAATC--CGATAGAGTCCTACCATCCTCGA 1116801 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||||||| ||| | || | || ||| || || || ||||| || |||||||| || Sbjct 1116802 GCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGGA 1116861 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||||| | || | ||||||| | ||| || |||| ||||| ||| || | Sbjct 1116862 TCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTAC 1116921 Query 133633 CGGTCAGA 133640 | || ||| Sbjct 1116922 CTGTAAGA 1116929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420322621960