Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq8 100 3e-16
seq1 95.1 1e-14
seq5 91.5 1e-13
>seq8
Length=1050647
Score = 100 bits (110), Expect = 3e-16
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
||||| | || ||||| || || || ||||| ||| | || |||| ||| ||||
Sbjct 744560 AAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGT--ACGACCGTCTTCGA 744503
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
| || || || ||| |||| | || |||||| || |||||||| ||||||||||| |
Sbjct 744502 GTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGAA 744443
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||| | | || | ||| |||| | ||| || |||| |||| |||||| |
Sbjct 744442 TCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATGGTTTTAC 744383
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| |||| ||| || ||||| || |||||
Sbjct 744382 CTGTCAAAGTCTTGACGAAGATTTGCAT 744355
>seq1
Length=2435598
Score = 95.1 bits (104), Expect = 1e-14
Identities = 429/672 (64%), Gaps = 6/672 (1%)
Strand=Plus/Minus
Query 148263 ACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCA 148322
|| || || ||||| || |||||||| || || ||| | |||||| || | || ||
Sbjct 132078 ACGACTTGGAACTCTCCAGCGAGCACACGACGAGTATAGATGTTGCTGGTGTAAGGCTCG 132019
Query 148323 AACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGC 148382
|| |||| || |||| ||||| | |||| || || ||||| ||| |||||
Sbjct 132018 AAGCACTCATTCCATCCCAGGATCTGAGACGTCGACGCGGTAGGCATCGGCGCGACCAGG 131959
Query 148383 AGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGC 148442
|| ||||| | || |||| | || || ||| ||| |||| || ||||||||||||
Sbjct 131958 AGGGAGTTTCTCAGACCGTGTTTGGCGATGTTGGCCTTGAGAGTCGACCAGTCCCAGAGT 131899
Query 148443 GGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCC 148502
| | ||| || | ||||| |||| | ||||| |||| ||| || || ||
Sbjct 131898 GAGGTCGGGGTAATACCCCACAGGTCGAATTGCAGCCTGCCCTCGCTGGCAGGAGATCCT 131839
Query 148503 TCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCG 148562
||| | ||| | || | | | || || ||||| | || || || ||
Sbjct 131838 GGGTAAGTCAGGTAGTGACCCTCAATCTCAGCAAGCTCGCAAGAAGATTCAAGAGCTGCG 131779
Query 148563 TAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGC 148622
| |||||| ||||| || | |||||| | ||| || ||| | |||
Sbjct 131778 TGGTAAATGGTCTCAAAGATCTTGAGGTTGAGTTCCCGGGCCTGAGGGCCATCGAATGGC 131719
Query 148623 ATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGT 148682
||||| || || || || ||||| || || || ||||| | |||| ||| || ||
Sbjct 131718 ATACGGAGAGCCATGAATGCATCGGCGAGACCTTGAACGCCGAGACCAACGGGTCGATGA 131659
Query 148683 TTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTG-T 148740
||||| ||| ||| || || || | || |||| |||| |||||||| |||| |
Sbjct 131658 CGCATGTTCGAGTTGCGGGC-TTCCGGAACGGGGTAGTAGTTGACGTCGATGACCTTGTT 131600
Query 148741 CAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCAT 148800
|||| || || ||||| |||| ||| | | || ||||||| | | |
Sbjct 131599 CAAG-TTCTTGGTGACGACCTTGGTAACGTCATGCAACTTCTGGAAGTCGTACTCGCCGT 131541
Query 148801 CTACGATGCAT-CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGG 148859
|||| || ||| | | ||||| || || | ||||| ||||| |||||||||
Sbjct 131540 TCGTGATGAATGCGGGT-AGGGCGAGCGAAGCCAAGTTGCAAACGGCGACCTCATCCGGA 131482
Query 148860 GCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTT 148919
|| | |||| | |||||||| |||| ||| | |||||| || | ||||| |
Sbjct 131481 GCAGAGAACTCGATGATCTCGGTACACAAGTTGGAAGACTTGATCGTTCCGAGGTTCTGT 131422
Query 148920 TGATTGCTCTTG 148931
|| ||| ||||
Sbjct 131421 TGGTTGGACTTG 131410
>seq5
Length=1209326
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/188 (71%), Gaps = 4/188 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512
||||| | || ||||| ||||| || |||||||| | || | | | | |||||||
Sbjct 1116744 AAATGAAGAGTAGACTCCTTCTGGATGTTGTAATC--CGATAGAGTCCTACCATCCTCGA 1116801
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||| ||| | || | || ||| || || || ||||| || |||||||| ||
Sbjct 1116802 GCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGGA 1116861
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | || | ||||||| | ||| || |||| ||||| ||| || |
Sbjct 1116862 TCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTAC 1116921
Query 133633 CGGTCAGA 133640
| || |||
Sbjct 1116922 CTGTAAGA 1116929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420322621960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |