Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 1e-19
seq16 86.0 1e-11
>seq1
Length=2435598
Score = 113 bits (124), Expect = 1e-19
Identities = 349/537 (65%), Gaps = 5/537 (1%)
Strand=Plus/Plus
Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597
|| || || ||||| || |||||||| |||||| |||| ||| ||| | || ||
Sbjct 130741 ATGAAGGAGGATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCC 130800
Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657
|| | | || || || ||| | || |||| | ||||| | || || | | |||
Sbjct 130801 AAGACAGCAGGTGGTATCGGTCTCAACATTCACAACATTCGTGCCAAGGGTTCTTACATC 130860
Query 110658 GCAACAGCGAA-GGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACAC 110716
|| | || |||| || ||| | | | ||||| ||| | ||| | | ||| ||
Sbjct 130861 GCTGGTACAAACGGGTACTCGAACGGTA-TCGTTCCTATGCTTCGAGCTTACGACGCAAC 130919
Query 110717 TGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGA 110773
|| ||| || ||||||||||||| | || || | ||||| || || |||||
Sbjct 130920 CGCTCGATACGTCGATCAAGGTGGTAACAAGCGACCAGGTGCTTTTGCCATTTACCTCGA 130979
Query 110774 ACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGA 110833
|| ||||| | || | || || || | || || || |||||||| || |||||
Sbjct 130980 GCCATGGCACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCACGGTAAAGAAGA 131039
Query 110834 ACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893
| |||| ||||||||||| || || ||||||| | ||| | |||||| |||||
Sbjct 131040 AGTTCGAGCTCGTGATTTATTCTACGCGTTGTGGATCCCGGATCTTTTCATGCGTCGTGT 131099
Query 110894 TCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGT 110953
|||| |||| |||| || | |||||||| ||| | |||||| || | |||
Sbjct 131100 AGAAGAGGATGGAGAGTGGGCTTTGATGTGTCCACATGAGTGTCCTGGATTAGCCGATTG 131159
Query 110954 ATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA 111013
||||||| | || || || || ||||| ||| || | | ||||||| | ||
Sbjct 131160 TCATGGAAAGGCTTTCGATGAACTATACGAGTCATACGAGAGGCAGGGCAAGTACAGGAA 131219
Query 111014 ACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGG 111070
|| ||| ||| |||| |||| | || || ||| |||| ||| |||||
Sbjct 131220 GATGATCAAAGCGCAAAAACTATGGTACGCTATTCTCGAAGCACAGACTGAGACTGG 131276
>seq16
Length=848844
Score = 86.0 bits (94), Expect = 1e-11
Identities = 177/261 (68%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 279875 GATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTA 279934
|| || ||||||||| ||||| ||| | ||||| |||| ||||| || ||| | |||
Sbjct 570019 GACGGCTTGAAACCTGGCCAGCGCAAGGTCCTATTCGGTTGCTTCAAGAGGAAACTTGTA 570078
Query 279935 AAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATCAC 279994
|| || || ||||| || | || ||||| ||||| || | | ||| ||||||
Sbjct 570079 AAAGAGATCAAAGTTGCGCAACTTGCCGGTTACGTTTCTGAGAAGACTTCTTACCATCAC 570138
Query 279995 GGTGAAGCGTCTCTTCAAGGTG-CTATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAAA 280053
|| ||| | | || | || |||| || ||||| || ||| || ||| ||
Sbjct 570139 GGCGAACAGAGT-TTGACCATGACTATCGTCGGTCTCGCTCAAACCTTCGTGGGAAGCAA 570197
Query 280054 CAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTCTCGTATTCACAATGGAAAAGA 280113
|||| | || |||| || || |||||||| ||| ||||| ||| ||||||||
Sbjct 570198 CAACATTAACTTGCTCGACCCCAACGGTCAATTCGGTACTCGTGCTCAGGGAGGAAAAGA 570257
Query 280114 TCATGGTAGTGCTCGTTACAT 280134
|| ||||||||||||||
Sbjct 570258 CGCTGCCAGTGCTCGTTACAT 570278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186811598722919
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |