Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq8 95.1 1e-14 seq1 82.4 7e-11 >seq8 Length=1050647 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | ||||| ||||| |||||||||||| | ||||| ||||| Sbjct 744564 AACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTC 744505 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||| |||||||||| | || | | ||| ||||| ||||| || ||||| || || Sbjct 744504 GAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTG 744445 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || || | | || | ||||||| | ||| ||||||| || | ||||| Sbjct 744444 AATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATGGTTTT 744385 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| |||| ||| || | ||| || ||||| Sbjct 744384 ACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355 >seq1 Length=2435598 Score = 82.4 bits (90), Expect = 7e-11 Identities = 164/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 146896 ACCACTTGAAACTCGCCCGCCAGCACACGTCTGAG-ATACACATTGCTAGTGAAAGGCTC 146954 || ||||| ||||| || || |||||||| | ||| ||| | ||||| ||| ||||||| Sbjct 132078 ACGACTTGGAACTCTCCAGCGAGCACACGAC-GAGTATAGATGTTGCTGGTGTAAGGCTC 132020 Query 146955 AAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAA 147014 || ||||||| || | || || | ||| | ||||||||||| ||| |||| Sbjct 132019 GAAGCACTCATTCCATCCCAGGATCTGAGACGTCGACGCGGTAGGCATCGGCGCGACCAG 131960 Query 147015 CAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCACAT 147074 | || |||| |||||||| ||||||| |||| | ||| ||||||||| | Sbjct 131959 GAGGGAGTTTCTCAGACCGTGTTTGGCGATGTTGGCCTTGAGAGTCGACCAGTCCCAGAG 131900 Query 147075 CGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACT--CCTCGACTGGCGGGA 147129 || | || || | ||||| |||| | || ||| || ||||| ||||| ||| Sbjct 131899 TGAGGTCGGGGTAATACCCCACAGGTCGAATTGCAGC-CTGCCCTCG-CTGGCAGGA 131845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610729346440