Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq11 84.2 2e-11 seq9 84.2 2e-11 >seq11 Length=975176 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 44186 ATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATA 44245 || |||||||| |||||||| ||| | |||||||| ||||| |||||||| ||||| ||| Sbjct 836884 ATCTTTTGGTTGAAGAAACGTGGTCTCATGCCTGGATTGACCTTTTCAAACGAGTTGATA 836825 Query 44246 AGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGC 44281 ||||||||||| | || |||||| || ||| Sbjct 836824 TCCCGTGATGAAGGTCTTCACACCGATTTCGCATGC 836789 >seq9 Length=1075742 Score = 84.2 bits (92), Expect = 2e-11 Identities = 184/273 (67%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 40692 TTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGG 40751 || || || || ||||| |||| | | |||| || ||| |||||| | | ||| Sbjct 472044 TTCCCATTACTCACTACTAAAAGAGTTTTTTTACGTGGTGTTGTTGAAGAATTACTTTGG 471985 Query 40752 TTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAAT 40811 ||||| |||| || ||| || |||||| || |||| | |||||| || Sbjct 471984 TTTATTCGGGGTTCAACAGATGGGAATTTATTATCGGATTTAGGAATTGGGATTTGGGAT 471925 Query 40812 GCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGAT 40871 | | | | || | |||||| || | ||||| ||||||| |||||||| Sbjct 471924 GGGAATGGAAGTAGAGAGTATTTGGATAAAGTTGGATTGAAAGATAGAAGACAAGGTGAT 471865 Query 40872 CTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGT-A 40930 ||||| || |||||||||||||| | | ||||||| |||||| |||||| ||| ||| | Sbjct 471864 CTTGGACCGGTTTATGGATTTCAATGGAGACATTTCGGAGCAGAATATGGGACT-TGTGA 471806 Query 40931 CTCTGATTATACCAATAAAGGAATGGATCAATT 40963 |||||||| ||||| |||||||||| Sbjct 471805 TGATGATTATAGAGGGAAAGGGGTGGATCAATT 471773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455617324395