Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq8 100 2e-16
seq1 86.0 5e-12
>seq8
Length=1050647
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||||||| | ||||| || ||||| || ||||||||| | | || ||||||||
Sbjct 744563 ACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCG 744504
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|| |||||||||||| |||| | | ||| ||||| || || | ||| || || ||
Sbjct 744503 AGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGA 744444
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| || | | || | || || | | || ||||| ||||| || | |||
Sbjct 744443 ATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATGGTTTTA 744384
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||| ||| || || ||||||||||||
Sbjct 744383 CCTGTCAAAGTCTTGACGAAGATTTGCATA 744354
Score = 86.0 bits (94), Expect = 5e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||||||||| || || || | || |||||||| ||||| || || | |||||| ||
Sbjct 744737 TCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATACCCTCCTTG 744678
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| |||||| ||||| | | || | || || | | || || || | || |||
Sbjct 744677 TCTTGAATCTTGGATTTCACGTTATCGATCGTATCGGAAGACTCTACCTCCAACGTGATA 744618
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||| || |||| |||||| ||||||||||||||
Sbjct 744617 GTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCAT 744583
>seq1
Length=2435598
Score = 86.0 bits (94), Expect = 5e-12
Identities = 246/375 (66%), Gaps = 5/375 (1%)
Strand=Plus/Minus
Query 131615 GGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACC 131674
|||||||| | | |||| | || | || ||| || || ||| || | |||||| | |
Sbjct 131132 GGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATC 131073
Query 131675 CATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAA 131734
|| |||||||| || | ||| | |||| |||||| |||| | ||||| | |
Sbjct 131072 CACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGA 131013
Query 131735 TTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTG 131794
| | |||||| |||| ||| || ||||| || || | || | || | || |||
Sbjct 131012 TCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGT 130953
Query 131795 CGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGC 131851
||||| ||| ||||||| || | ||| | | || ||| | || | ||| ||
Sbjct 130952 CGCTTGTTACCACCTTGATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGA 130893
Query 131852 TCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTG 131911
| | |||||| | || || || || | ||||| || ||||| | || |||
Sbjct 130892 ACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTG 130833
Query 131912 TGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGT 131970
|||| |||||| || ||||| || || || || ||||| | || || | | |||||
Sbjct 130832 TGAATGTTGAGACCGATACCACCTGCTGTCTTG-GAGATCATGGCACAAGTTTTGAGAGT 130774
Query 131971 GTTATAGATACCTTC 131985
| ||||||||||||
Sbjct 130773 ATCATAGATACCTTC 130759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933990867848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |