Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq8 100 2e-16 seq1 86.0 5e-12 >seq8 Length=1050647 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | ||||| || ||||| || ||||||||| | | || |||||||| Sbjct 744563 ACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCG 744504 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || |||||||||||| |||| | | ||| ||||| || || | ||| || || || Sbjct 744503 AGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGA 744444 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | || | || || | | || ||||| ||||| || | ||| Sbjct 744443 ATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATGGTTTTA 744384 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||| || || |||||||||||| Sbjct 744383 CCTGTCAAAGTCTTGACGAAGATTTGCATA 744354 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||||||||| || || || | || |||||||| ||||| || || | |||||| || Sbjct 744737 TCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATACCCTCCTTG 744678 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| ||||| | | || | || || | | || || || | || ||| Sbjct 744677 TCTTGAATCTTGGATTTCACGTTATCGATCGTATCGGAAGACTCTACCTCCAACGTGATA 744618 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| || |||| |||||| |||||||||||||| Sbjct 744617 GTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCAT 744583 >seq1 Length=2435598 Score = 86.0 bits (94), Expect = 5e-12 Identities = 246/375 (66%), Gaps = 5/375 (1%) Strand=Plus/Minus Query 131615 GGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACC 131674 |||||||| | | |||| | || | || ||| || || ||| || | |||||| | | Sbjct 131132 GGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATC 131073 Query 131675 CATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAA 131734 || |||||||| || | ||| | |||| |||||| |||| | ||||| | | Sbjct 131072 CACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGA 131013 Query 131735 TTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTG 131794 | | |||||| |||| ||| || ||||| || || | || | || | || ||| Sbjct 131012 TCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGT 130953 Query 131795 CGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGC 131851 ||||| ||| ||||||| || | ||| | | || ||| | || | ||| || Sbjct 130952 CGCTTGTTACCACCTTGATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGA 130893 Query 131852 TCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTG 131911 | | |||||| | || || || || | ||||| || ||||| | || ||| Sbjct 130892 ACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTG 130833 Query 131912 TGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGT 131970 |||| |||||| || ||||| || || || || ||||| | || || | | ||||| Sbjct 130832 TGAATGTTGAGACCGATACCACCTGCTGTCTTG-GAGATCATGGCACAAGTTTTGAGAGT 130774 Query 131971 GTTATAGATACCTTC 131985 | |||||||||||| Sbjct 130773 ATCATAGATACCTTC 130759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933990867848