Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq6 219 1e-51
seq8 140 1e-27
seq5 98.7 3e-15
>seq6
Length=1164049
Score = 219 bits (242), Expect = 1e-51
Identities = 667/1027 (65%), Gaps = 8/1027 (1%)
Strand=Plus/Plus
Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666
||||| || | || || |||||||| || || || | |||||| || || || |||
Sbjct 169067 GATGCCGTCGTCACCGTCCCAGCCTACTTCAACGACTCTCAGCGTCAAGCTACCAAGGAT 169126
Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726
|| || || || || | ||||| || |||| || || || || ||||| || ||
Sbjct 169127 GCCGGTTTGATCGCTGGTCTCAATGTCCTCCGAATCATCAACGAGCCAACTGCCGCTGCC 169186
Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCAAG--aaaaaaaTATTCTTATTTTTGATT 349784
|| ||||| || || ||||| | ||| || | | || || |||| || || || |
Sbjct 169187 ATCGCATACGGACTCGATAAGA--AGTCCGCAGGTGAGAAGAACGTTCTCATCTTCGACT 169244
Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTA 349844
| || ||||||||||| |||||||| || || || | || ||||| || || || || |
Sbjct 169245 TGGGAGGTGGTACTTTCGATGTATCTCTCCTTACTATCGAGGAGGGTATCTTCGAGGTCA 169304
Query 349845 AAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGC 349904
| || || || ||||| || ||| | ||||| ||||| || || || |||||||| |
Sbjct 169305 AGGCCACCGCCGGTGACACCCATTTGGGTGGTGAAGACTTCGACAACCGTCTCGTCAACC 169364
Query 349905 ATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAA 349964
| |||||| | || || ||| | | || | ||| || | || || | ||
Sbjct 169365 ACTTTGTTCAGGAGTTCAAGAGGAAGAACAAGAAGGATCTTTCATCCAACGCTCGTGCTC 169424
Query 349965 TGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAA 350024
| ||||| || |||| |||||||||||||| ||||| || | || || | | || |
Sbjct 169425 TCCGTCGTCTCCGAACCGCGTGTGAACGTGCCAAGCGAACCCTCTCTTCCGCCGCGCAGA 169484
Query 350025 CCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCA--TCTATTACACG 350082
|||| || || ||||| || || ||| || | || ||||| || || || || ||
Sbjct 169485 CCTCGATCGAGATTGACTCCCTCTTTGACGGTATCGA--TCTTTACACTTCGATCACCCG 169542
Query 350083 TGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAA 350142
|||||| || || || | || ||| || || || | || ||||| || || || ||
Sbjct 169543 TGCTCGATTCGAGGAGCTCTGCCAGGACCTCTTCCGATCGACCATGGACCCGGTCGAGAA 169602
Query 350143 AGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGG 350202
|| | ||||| |||| || ||| | || || | || | || |||||
Sbjct 169603 GGTTCTCAAAGACTCAAAGATCGACAAGGCTTCCGTTAGCGAGATCGTCCTCGTCGGTGG 169662
Query 350203 TTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACC 350262
||| || ||||| |||||| ||||| || | |||| || | || || |||||
Sbjct 169663 TTCCACTCGTATCCCAAAAATTCAAAAGCTCGTATCCGACATGTTCTCCGGTCGTGAACC 169722
Query 350263 TTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322
| || || || || |||||||| || ||||| |||||||||||||| || ||||
Sbjct 169723 AAACCGTTCGATCAACCCCGATGAAGCCGTCGCATACGGTGCTGCTGTTCAAGCCGCTAT 169782
Query 350323 TTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACT 350382
| | || | | || || | | ||||| | | || || || |||| ||
Sbjct 169783 CCTCACCGGTGACACCTCGTCAAAGACCCAGGATCTCCTCTTGCTCGACGTCGCTCCTCT 169842
Query 350383 TTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTAC 350442
|| || | || || |||||| || ||||| || || |||| | ||
Sbjct 169843 CTCTACCGGTATCGAGACCGCTGGTGGTGTCATGACCCCGCTCATCAAGCGAAACACCAC 169902
Query 350443 TGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAAC 350502
|| ||||| ||||||||| | | || || || | | || || ||||||| ||
Sbjct 169903 CGTTCCTACCAAAAAGTCCGAGATCTTCTCCACCTACTCGGACAACCAGCCAGGTGTGCT 169962
Query 350503 AATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATT 350562
|| || || | || ||||||||||| || || || ||| || || ||| | ||
Sbjct 169963 CATCCAGGTCTACGAGGGTGAACGTGCACGAACCAAGGATTGCAACCTCCTCGGAAAGTT 170022
Query 350563 TACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGA 350622
|| | | |||||||| ||| | || || || || || |||||| | |||||
Sbjct 170023 CGAGCTCACCGGTATTCCACCCGCTCCTCGTGGTGTCCCCCAAATCGAAGTCACCTTCGA 170082
Query 350623 TATTGAT 350629
||| |||
Sbjct 170083 TATCGAT 170089
>seq8
Length=1050647
Score = 140 bits (154), Expect = 1e-27
Identities = 172/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| |||||||| | || ||||| | |||||| |||||||| ||||| || || |
Sbjct 744589 TTTGCATTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGT 744530
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || || ||||| |||||||| || || || || | | |||||||
Sbjct 744529 AGTCGGAGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGAT 744470
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
||||||| || ||||| || || ||||| || | ||||||||||| |||| ||| || |
Sbjct 744469 CAGGAGGGATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAG 744410
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || || | || || || || | || || || || || |||||
Sbjct 744409 ACTCGACTTCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355
Score = 125 bits (138), Expect = 2e-23
Identities = 134/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621
|||||||| ||||| | |||||||| || || |||||||||||||| ||||| ||||||
Sbjct 744758 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 744699
Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681
||||| ||||| || || || || ||||| || | ||| || ||||| |||| ||| ||
Sbjct 744698 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACGTTATCGATCGTATCGGAA 744639
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
| || || || | || | || || || || | ||||| ||||| || ||||||
Sbjct 744638 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 744582
Score = 114 bits (126), Expect = 4e-20
Identities = 117/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 140560 TATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCT 140619
|||||||| ||||| | |||||| || | || || |||||||| || | | || |
Sbjct 743362 TATAATCACTCAATGTCCTCCCATCCTCCAACTGCTTCCCAGCAAAAATCAACCTCTGTT 743303
Query 140620 GATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAG 140679
||||||| ||||| ||||||||||| ||||| || | ||| |||||||| |||| ||| |
Sbjct 743302 GATCAGGTGGAATACCTTCTTTATCTTGAATCTTTGATTTGACATTATCGATCGTATCTG 743243
Query 140680 ATGGTTCAACTTCAAGTGTAACTGTCTTTCCGG 140712
||| ||| ||||| || || | ||||| | |||
Sbjct 743242 ATGATTCGACTTCGAGGGTGATTGTCTATGCGG 743210
Score = 100 bits (110), Expect = 9e-16
Identities = 102/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 140560 TATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCT 140619
|||||||| || || | || ||||| | |||||| ||||| || || |||||||| |
Sbjct 743793 TATAATCACTCAAAGTCCTACCGTCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTT 743734
Query 140620 GATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAG 140679
||||||| || || ||||||||||| ||||| || | ||| |||||||| || | ||| |
Sbjct 743733 GATCAGGTGGGATACCTTCTTTATCTTGAATCTTGGATTTGACATTATCGATAGTATCGG 743674
Query 140680 ATGGTTCAACTTC 140692
| | ||| || ||
Sbjct 743673 AAGATTCGACCTC 743661
>seq5
Length=1209326
Score = 98.7 bits (108), Expect = 3e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || | ||||||||||||||| || || || || ||||| ||
Sbjct 1116722 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 1116781
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
|| || | ||||| || || || || ||||| ||||| | | || |||||||| ||
Sbjct 1116782 TAGAGTCCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 1116841
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|| || || || ||||| || || | || ||||| || || | || || | |||||
Sbjct 1116842 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1116901
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAG 140716
|| || || | ||||| || || ||
Sbjct 1116902 CTCGAGGGTGATGGTCTTACCTGTAAG 1116928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515252866278437
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |