Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq6 219 1e-51 seq8 140 1e-27 seq5 98.7 3e-15 >seq6 Length=1164049 Score = 219 bits (242), Expect = 1e-51 Identities = 667/1027 (65%), Gaps = 8/1027 (1%) Strand=Plus/Plus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 ||||| || | || || |||||||| || || || | |||||| || || || ||| Sbjct 169067 GATGCCGTCGTCACCGTCCCAGCCTACTTCAACGACTCTCAGCGTCAAGCTACCAAGGAT 169126 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || || || || || | ||||| || |||| || || || || ||||| || || Sbjct 169127 GCCGGTTTGATCGCTGGTCTCAATGTCCTCCGAATCATCAACGAGCCAACTGCCGCTGCC 169186 Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCAAG--aaaaaaaTATTCTTATTTTTGATT 349784 || ||||| || || ||||| | ||| || | | || || |||| || || || | Sbjct 169187 ATCGCATACGGACTCGATAAGA--AGTCCGCAGGTGAGAAGAACGTTCTCATCTTCGACT 169244 Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTA 349844 | || ||||||||||| |||||||| || || || | || ||||| || || || || | Sbjct 169245 TGGGAGGTGGTACTTTCGATGTATCTCTCCTTACTATCGAGGAGGGTATCTTCGAGGTCA 169304 Query 349845 AAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGC 349904 | || || || ||||| || ||| | ||||| ||||| || || || |||||||| | Sbjct 169305 AGGCCACCGCCGGTGACACCCATTTGGGTGGTGAAGACTTCGACAACCGTCTCGTCAACC 169364 Query 349905 ATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAA 349964 | |||||| | || || ||| | | || | ||| || | || || | || Sbjct 169365 ACTTTGTTCAGGAGTTCAAGAGGAAGAACAAGAAGGATCTTTCATCCAACGCTCGTGCTC 169424 Query 349965 TGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAA 350024 | ||||| || |||| |||||||||||||| ||||| || | || || | | || | Sbjct 169425 TCCGTCGTCTCCGAACCGCGTGTGAACGTGCCAAGCGAACCCTCTCTTCCGCCGCGCAGA 169484 Query 350025 CCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCA--TCTATTACACG 350082 |||| || || ||||| || || ||| || | || ||||| || || || || || Sbjct 169485 CCTCGATCGAGATTGACTCCCTCTTTGACGGTATCGA--TCTTTACACTTCGATCACCCG 169542 Query 350083 TGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAA 350142 |||||| || || || | || ||| || || || | || ||||| || || || || Sbjct 169543 TGCTCGATTCGAGGAGCTCTGCCAGGACCTCTTCCGATCGACCATGGACCCGGTCGAGAA 169602 Query 350143 AGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGG 350202 || | ||||| |||| || ||| | || || | || | || ||||| Sbjct 169603 GGTTCTCAAAGACTCAAAGATCGACAAGGCTTCCGTTAGCGAGATCGTCCTCGTCGGTGG 169662 Query 350203 TTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACC 350262 ||| || ||||| |||||| ||||| || | |||| || | || || ||||| Sbjct 169663 TTCCACTCGTATCCCAAAAATTCAAAAGCTCGTATCCGACATGTTCTCCGGTCGTGAACC 169722 Query 350263 TTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322 | || || || || |||||||| || ||||| |||||||||||||| || |||| Sbjct 169723 AAACCGTTCGATCAACCCCGATGAAGCCGTCGCATACGGTGCTGCTGTTCAAGCCGCTAT 169782 Query 350323 TTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACT 350382 | | || | | || || | | ||||| | | || || || |||| || Sbjct 169783 CCTCACCGGTGACACCTCGTCAAAGACCCAGGATCTCCTCTTGCTCGACGTCGCTCCTCT 169842 Query 350383 TTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTAC 350442 || || | || || |||||| || ||||| || || |||| | || Sbjct 169843 CTCTACCGGTATCGAGACCGCTGGTGGTGTCATGACCCCGCTCATCAAGCGAAACACCAC 169902 Query 350443 TGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAAC 350502 || ||||| ||||||||| | | || || || | | || || ||||||| || Sbjct 169903 CGTTCCTACCAAAAAGTCCGAGATCTTCTCCACCTACTCGGACAACCAGCCAGGTGTGCT 169962 Query 350503 AATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATT 350562 || || || | || ||||||||||| || || || ||| || || ||| | || Sbjct 169963 CATCCAGGTCTACGAGGGTGAACGTGCACGAACCAAGGATTGCAACCTCCTCGGAAAGTT 170022 Query 350563 TACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGA 350622 || | | |||||||| ||| | || || || || || |||||| | ||||| Sbjct 170023 CGAGCTCACCGGTATTCCACCCGCTCCTCGTGGTGTCCCCCAAATCGAAGTCACCTTCGA 170082 Query 350623 TATTGAT 350629 ||| ||| Sbjct 170083 TATCGAT 170089 >seq8 Length=1050647 Score = 140 bits (154), Expect = 1e-27 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||| | || ||||| | |||||| |||||||| ||||| || || | Sbjct 744589 TTTGCATTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGT 744530 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || ||||| |||||||| || || || || | | ||||||| Sbjct 744529 AGTCGGAGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGAT 744470 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || ||||| || || ||||| || | ||||||||||| |||| ||| || | Sbjct 744469 CAGGAGGGATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAG 744410 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || | || || || || | || || || || || ||||| Sbjct 744409 ACTCGACTTCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355 Score = 125 bits (138), Expect = 2e-23 Identities = 134/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 |||||||| ||||| | |||||||| || || |||||||||||||| ||||| |||||| Sbjct 744758 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 744699 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 ||||| ||||| || || || || ||||| || | ||| || ||||| |||| ||| || Sbjct 744698 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACGTTATCGATCGTATCGGAA 744639 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || | || | || || || || | ||||| ||||| || |||||| Sbjct 744638 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 744582 Score = 114 bits (126), Expect = 4e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 140560 TATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCT 140619 |||||||| ||||| | |||||| || | || || |||||||| || | | || | Sbjct 743362 TATAATCACTCAATGTCCTCCCATCCTCCAACTGCTTCCCAGCAAAAATCAACCTCTGTT 743303 Query 140620 GATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAG 140679 ||||||| ||||| ||||||||||| ||||| || | ||| |||||||| |||| ||| | Sbjct 743302 GATCAGGTGGAATACCTTCTTTATCTTGAATCTTTGATTTGACATTATCGATCGTATCTG 743243 Query 140680 ATGGTTCAACTTCAAGTGTAACTGTCTTTCCGG 140712 ||| ||| ||||| || || | ||||| | ||| Sbjct 743242 ATGATTCGACTTCGAGGGTGATTGTCTATGCGG 743210 Score = 100 bits (110), Expect = 9e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 140560 TATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCT 140619 |||||||| || || | || ||||| | |||||| ||||| || || |||||||| | Sbjct 743793 TATAATCACTCAAAGTCCTACCGTCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTT 743734 Query 140620 GATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAG 140679 ||||||| || || ||||||||||| ||||| || | ||| |||||||| || | ||| | Sbjct 743733 GATCAGGTGGGATACCTTCTTTATCTTGAATCTTGGATTTGACATTATCGATAGTATCGG 743674 Query 140680 ATGGTTCAACTTC 140692 | | ||| || || Sbjct 743673 AAGATTCGACCTC 743661 >seq5 Length=1209326 Score = 98.7 bits (108), Expect = 3e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | ||||||||||||||| || || || || ||||| || Sbjct 1116722 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 1116781 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 || || | ||||| || || || || ||||| ||||| | | || |||||||| || Sbjct 1116782 TAGAGTCCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 1116841 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || || ||||| || || | || ||||| || || | || || | ||||| Sbjct 1116842 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1116901 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAG 140716 || || || | ||||| || || || Sbjct 1116902 CTCGAGGGTGATGGTCTTACCTGTAAG 1116928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515252866278437