Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 5e-26
>seq1
Length=2435598
Score = 132 bits (146), Expect = 5e-26
Identities = 327/491 (67%), Gaps = 4/491 (1%)
Strand=Plus/Minus
Query 79299 GAAAGCCTCCCCATAGACA-TCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCC 79357
|||||||| |||| |||| |||| | || || ||||| || || ||||||| ||
Sbjct 131175 GAAAGCCTTTCCAT-GACAATCGGCTAATCCAGGACACTCATGTGGACACATCAAAGCCC 131117
Query 79358 AGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGA 79417
| || | |||| || || |||||| || ||||||||||||| || ||| |
Sbjct 131116 ACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGCGTAGAATA 131057
Query 79418 GGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGA 79477
|| || || | || || | || || || || || |||| |||||| | |
Sbjct 131056 AATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAAGTCGAAAA 130997
Query 79478 TGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCT 79537
|||||||||||| ||||| || || ||||| || | ||| |||||| || || |
Sbjct 130996 CGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGTCGCTTGTTACCACCTT 130937
Query 79538 GGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA 79597
| | |||||| || || || || | || |||| ||||| || ||||| |||| | |
Sbjct 130936 GATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACCGTTCGAGT 130877
Query 79598 CGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCG 79656
||||| || || ||| | ||| | || |||||||| | | | || || |||
Sbjct 130876 ACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTT-GTGAATGTTGAGACCG 130818
Query 79657 ATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCG 79716
|| || || | ||||||||| || || ||||| || || ||||| || |||
Sbjct 130817 ATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGATACCTTCG 130758
Query 79717 ATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCG 79776
|| || || |||||||| |||| ||||| || ||| | ||||||| |||||
Sbjct 130757 ATGGAATCCTCCTTCATCGCGATGAGGAAACATGACGAAAGTTGTGGGTGAGGTGTACCC 130698
Query 79777 GCGTTGAAGAG 79787
|||||||| ||
Sbjct 130697 GCGTTGAAAAG 130687
Score = 122 bits (134), Expect = 1e-22
Identities = 360/545 (66%), Gaps = 10/545 (2%)
Strand=Plus/Plus
Query 19217 CTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276
||||||||||| ||||| |||| || | ||| |||||||| | || ||||||
Sbjct 130687 CTTTTCAACGCGGGTACACCTCACCCACAACTTTCGTCATGTTTCCTCATCGCGATGAAG 130746
Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336
|| || ||| || || ||||| || || ||||| || || |||||||||
Sbjct 130747 GAGGATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCCAAGACA 130806
Query 19337 TCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGG 19395
| || |||||||| || || | | | || || || | | ||| | ||| |||
Sbjct 130807 GCAGGTGGTATCGGTCTCAACATTCAC-AACATTCGTGCCAAGGGTTCTTACATCGCTGG 130865
Query 19396 GACGAACGGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCA 19454
|| ||||| ||| ||| ||||||||| || ||||| || | | | || || ||
Sbjct 130866 TACAAACGG-GTACTCGAACGGTATCGTTCCTATGCTTCGAGCTTACGACGCAACCGCTC 130924
Query 19455 GGTACGTCAACCAGGGGGGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCC 19512
| |||||| | || || || ||| || || | ||| || ||||| |||||||||||
Sbjct 130925 GATACGTCGATCAAGGTGGTAACAAGCGACCAGGTGCT--TTTGCCATTTACCTCGAGCC 130982
Query 19513 ATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGAT 19572
||||||||| ||||| | || || |||| || || || || ||| | || || |
Sbjct 130983 ATGGCACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCACGGTAAAGAAGAAGT 131042
Query 19573 GCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGA 19632
|| ||| || | ||| || |||||||| ||||| || |||||| || ||
Sbjct 131043 TCGAGCTCGTGATTTATTCTACGCGTTGTGGATCCCGGATCTTTTCATGCGTCGTGTAGA 131102
Query 19633 GAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGA-CGTCT 19691
|||| | ||| ||| ||||||| || || || || ||||| || |||| |||
Sbjct 131103 AGAGGATGGAGAGTGGGCTTTGATGTGTCCACATGAGTGTCCTGGATTAGCCGATTGTC- 131161
Query 19692 ACGGCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGG 19751
| || |||| ||| |||| | ||| | | |||| |||||| || || ||||
Sbjct 131162 ATGGAAAGGCTTTCGATGAACTATACGAGTCATACGAGAGGCAGGGCAAGTACAGGAAGA 131221
Query 19752 TGGTC 19756
|| ||
Sbjct 131222 TGATC 131226
Score = 122 bits (134), Expect = 1e-22
Identities = 146/196 (74%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 78187 CGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATA 78246
|| ||||| | |||||||||||| || ||||| ||||||||||| ||||| | ||||||
Sbjct 132461 CGAGTTCGGAGATAGTACATGCCGGTTTTGAGTCCCTTCTTCCAACCGTAGAAGTGCATC 132402
Query 78247 CTCGACAGCTTGGCCAG-ACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTC 78305
| || ||| || | | || || || | |||||||||||| |||||||||||
Sbjct 132401 GAGGTGAG-TTGACCTGGAGATGGATTGGTCAAGTGGATGTTGAGCGATTGGGACTGGTC 132343
Query 78306 GATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGAT 78365
||| | ||||| |||||||| || | |||||||| | ||| || ||||||||||
Sbjct 132342 GATAAAGGCACCACGGTCGGCAGCGAGGTCGATGATGGCCTTCTGGCTGATCTCCCAGAC 132283
Query 78366 GGTCCGGTAAATGGCC 78381
||| |||||| |||
Sbjct 132282 CGTCTTGTAAATAGCC 132267
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 20627 ATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGC 20686
||||||| ||| || ||||| ||| |||||| |||||||||| | || ||||| ||
Sbjct 132271 ATTTACAAGACGGTCTGGGAGATCAGCCAGAAGGCCATCATCGACCTCGCTGCCGACCGT 132330
Query 20687 GGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCC-GAGCCTGGC 20745
|| |||| |||||||||||||| |||||||| || | || ||||| || ||
Sbjct 132331 GGTGCCTTTATCGACCAGTCCCAATCGCTCAACATCCACTTGACCAATCCATCTCCAGGT 132390
Query 20746 GAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTA 20805
|| || | ||| ||||| | ||||| ||| | ||||| ||||| || |||||||||||
Sbjct 132391 CAA-CTCACCTCGATGCACTTCTACGGTTGGAAGAAGGGACTCAAAACCGGCATGTACTA 132449
Query 20806 TCTGCGGACCCGA 20818
||| || || |||
Sbjct 132450 TCTCCGAACTCGA 132462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524258331760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |