Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1 132 5e-26 >seq1 Length=2435598 Score = 132 bits (146), Expect = 5e-26 Identities = 327/491 (67%), Gaps = 4/491 (1%) Strand=Plus/Minus Query 79299 GAAAGCCTCCCCATAGACA-TCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCC 79357 |||||||| |||| |||| |||| | || || ||||| || || ||||||| || Sbjct 131175 GAAAGCCTTTCCAT-GACAATCGGCTAATCCAGGACACTCATGTGGACACATCAAAGCCC 131117 Query 79358 AGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGA 79417 | || | |||| || || |||||| || ||||||||||||| || ||| | Sbjct 131116 ACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGCGTAGAATA 131057 Query 79418 GGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGA 79477 || || || | || || | || || || || || |||| |||||| | | Sbjct 131056 AATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAAGTCGAAAA 130997 Query 79478 TGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCT 79537 |||||||||||| ||||| || || ||||| || | ||| |||||| || || | Sbjct 130996 CGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGTCGCTTGTTACCACCTT 130937 Query 79538 GGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA 79597 | | |||||| || || || || | || |||| ||||| || ||||| |||| | | Sbjct 130936 GATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACCGTTCGAGT 130877 Query 79598 CGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCG 79656 ||||| || || ||| | ||| | || |||||||| | | | || || ||| Sbjct 130876 ACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTT-GTGAATGTTGAGACCG 130818 Query 79657 ATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCG 79716 || || || | ||||||||| || || ||||| || || ||||| || ||| Sbjct 130817 ATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGATACCTTCG 130758 Query 79717 ATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCG 79776 || || || |||||||| |||| ||||| || ||| | ||||||| ||||| Sbjct 130757 ATGGAATCCTCCTTCATCGCGATGAGGAAACATGACGAAAGTTGTGGGTGAGGTGTACCC 130698 Query 79777 GCGTTGAAGAG 79787 |||||||| || Sbjct 130697 GCGTTGAAAAG 130687 Score = 122 bits (134), Expect = 1e-22 Identities = 360/545 (66%), Gaps = 10/545 (2%) Strand=Plus/Plus Query 19217 CTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276 ||||||||||| ||||| |||| || | ||| |||||||| | || |||||| Sbjct 130687 CTTTTCAACGCGGGTACACCTCACCCACAACTTTCGTCATGTTTCCTCATCGCGATGAAG 130746 Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336 || || ||| || || ||||| || || ||||| || || ||||||||| Sbjct 130747 GAGGATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCCAAGACA 130806 Query 19337 TCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGG 19395 | || |||||||| || || | | | || || || | | ||| | ||| ||| Sbjct 130807 GCAGGTGGTATCGGTCTCAACATTCAC-AACATTCGTGCCAAGGGTTCTTACATCGCTGG 130865 Query 19396 GACGAACGGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCA 19454 || ||||| ||| ||| ||||||||| || ||||| || | | | || || || Sbjct 130866 TACAAACGG-GTACTCGAACGGTATCGTTCCTATGCTTCGAGCTTACGACGCAACCGCTC 130924 Query 19455 GGTACGTCAACCAGGGGGGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCC 19512 | |||||| | || || || ||| || || | ||| || ||||| ||||||||||| Sbjct 130925 GATACGTCGATCAAGGTGGTAACAAGCGACCAGGTGCT--TTTGCCATTTACCTCGAGCC 130982 Query 19513 ATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGAT 19572 ||||||||| ||||| | || || |||| || || || || ||| | || || | Sbjct 130983 ATGGCACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCACGGTAAAGAAGAAGT 131042 Query 19573 GCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGA 19632 || ||| || | ||| || |||||||| ||||| || |||||| || || Sbjct 131043 TCGAGCTCGTGATTTATTCTACGCGTTGTGGATCCCGGATCTTTTCATGCGTCGTGTAGA 131102 Query 19633 GAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGA-CGTCT 19691 |||| | ||| ||| ||||||| || || || || ||||| || |||| ||| Sbjct 131103 AGAGGATGGAGAGTGGGCTTTGATGTGTCCACATGAGTGTCCTGGATTAGCCGATTGTC- 131161 Query 19692 ACGGCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGG 19751 | || |||| ||| |||| | ||| | | |||| |||||| || || |||| Sbjct 131162 ATGGAAAGGCTTTCGATGAACTATACGAGTCATACGAGAGGCAGGGCAAGTACAGGAAGA 131221 Query 19752 TGGTC 19756 || || Sbjct 131222 TGATC 131226 Score = 122 bits (134), Expect = 1e-22 Identities = 146/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 78187 CGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATA 78246 || ||||| | |||||||||||| || ||||| ||||||||||| ||||| | |||||| Sbjct 132461 CGAGTTCGGAGATAGTACATGCCGGTTTTGAGTCCCTTCTTCCAACCGTAGAAGTGCATC 132402 Query 78247 CTCGACAGCTTGGCCAG-ACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTC 78305 | || ||| || | | || || || | |||||||||||| ||||||||||| Sbjct 132401 GAGGTGAG-TTGACCTGGAGATGGATTGGTCAAGTGGATGTTGAGCGATTGGGACTGGTC 132343 Query 78306 GATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGAT 78365 ||| | ||||| |||||||| || | |||||||| | ||| || |||||||||| Sbjct 132342 GATAAAGGCACCACGGTCGGCAGCGAGGTCGATGATGGCCTTCTGGCTGATCTCCCAGAC 132283 Query 78366 GGTCCGGTAAATGGCC 78381 ||| |||||| ||| Sbjct 132282 CGTCTTGTAAATAGCC 132267 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 20627 ATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGC 20686 ||||||| ||| || ||||| ||| |||||| |||||||||| | || ||||| || Sbjct 132271 ATTTACAAGACGGTCTGGGAGATCAGCCAGAAGGCCATCATCGACCTCGCTGCCGACCGT 132330 Query 20687 GGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCC-GAGCCTGGC 20745 || |||| |||||||||||||| |||||||| || | || ||||| || || Sbjct 132331 GGTGCCTTTATCGACCAGTCCCAATCGCTCAACATCCACTTGACCAATCCATCTCCAGGT 132390 Query 20746 GAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTA 20805 || || | ||| ||||| | ||||| ||| | ||||| ||||| || ||||||||||| Sbjct 132391 CAA-CTCACCTCGATGCACTTCTACGGTTGGAAGAAGGGACTCAAAACCGGCATGTACTA 132449 Query 20806 TCTGCGGACCCGA 20818 ||| || || ||| Sbjct 132450 TCTCCGAACTCGA 132462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524258331760