Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 167 3e-36 >seq1 Length=2435598 Score = 167 bits (184), Expect = 3e-36 Identities = 320/464 (69%), Gaps = 6/464 (1%) Strand=Plus/Plus Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353 || |||||||| ||||| |||||| || | ||| || ||||| | ||||||||| Sbjct 130687 CTTTTCAACGCGGGTACACCTCACCCACAACTTTCGTCATGTTTCCTCATCGCGATGAAG 130746 Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413 || || || ||||| || ||||| || || ||||| |||||| ||||||||| Sbjct 130747 GAGGATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCCAAGACA 130806 Query 53414 TCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGG 53472 | |||||||||||| || || | | | ||| | ||||| || || | ||| || Sbjct 130807 GCAGGTGGTATCGGTCTCAACATTCAC-AACATTCGTGCCAAGGGTTCTTACATCGCTGG 130865 Query 53473 GACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCG 53532 || ||||| | | | || ||||| |||||||| || | | | || || || || Sbjct 130866 TACAAACGGGTACTCGAACGGTATCGTTCCTATGCTTCGAGCTTACGACGCAACCGCTCG 130925 Query 53533 GTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGT 53591 |||||| | || |||||| ||||| | ||| | | || ||||| ||||||||||| | Sbjct 130926 ATACGTCGATCAAGGTGGTAACAAGCGACCAGGTG-CTTTTGCCATTTACCTCGAGCCAT 130984 Query 53592 GGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGC 53651 ||||||||||| || | || ||| |||| || || ||||| ||| | ||||| | | Sbjct 130985 GGCACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCACGGTAAAGAAGAAGTTC 131044 Query 53652 GCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAG 53710 | ||||| | || ||| || ||||||| ||||| || ||||||| || || Sbjct 131045 GAGCTCGTGATTTATTCTAC-GCGTTGTGGATCCCGGATCTTTTCATGCGTCGTGTAGAA 131103 Query 53711 AAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGG 53754 |||| | |||||| ||||||| || | ||||| || || Sbjct 131104 GAGGATGGAGAGTGGGCTTTGATGTGTCCACATGAGTGTCCTGG 131147 Score = 123 bits (136), Expect = 3e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 55736 ATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGT 55795 |||||| |||||| |||||||| |||||| | || ||| | ||| || ||| Sbjct 132271 ATTTACAAGACGGTCTGGGAGATCAGCCAGAAGGCCATCATCGACCTCGCTGCCGACCGT 132330 Query 55796 GGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTC-ACTGGC 55854 ||||| | |||||||||||||| || || |||||| | || ||||| || | || Sbjct 132331 GGTGCCTTTATCGACCAGTCCCAATCGCTCAACATCCACTTGACCAATCCATCTCCAGGT 132390 Query 55855 CAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTA 55914 ||| | | |||||||||||| ||||| ||||||||||||||||| || || |||||||| Sbjct 132391 CAA-CTCACCTCGATGCACTTCTACGGTTGGAAGAAGGGACTCAAAACCGGCATGTACTA 132449 Query 55915 TCTGCGGACCCG 55926 ||| || || || Sbjct 132450 TCTCCGAACTCG 132461 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 55487 AACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAAC 55546 |||||||| || || ||||| ||||| |||||||||||| |||||||| |||| || Sbjct 131951 AACTCCCTCCTGGTCGCGCCGATGCCTACCGCGTCGACGTCTCAGATCCTGGGATGGAAT 132010 Query 55547 GAGGCGTTCGAGCCGTACACGACCAACATCTA 55578 ||| |||||||| ||||| | ||||||||| Sbjct 132011 GAGTGCTTCGAGCCTTACACCAGCAACATCTA 132042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215459624200