Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq8 145 9e-30
seq5 132 5e-26
>seq8
Length=1050647
Score = 145 bits (160), Expect = 9e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | || || || || || ||||| || || |||||
Sbjct 744355 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAAACCATCACTCTCGAAGTCGAGTCTTCC 744414
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| | ||| | || ||||| |||||||| || || ||||| || |||
Sbjct 744415 GATACGATCGATAATGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTGATCAG 744474
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | ||||| || ||||| |||||||| || | |||||| || | ||||| ||
Sbjct 744475 CAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAAC 744534
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||||||||| || || |||||| | || | || ||||| ||||||
Sbjct 744535 ATCCAAAAGGAGTCTACACTTCATTTGGTTCTCCGACTTCGTGGTGGA 744582
Score = 118 bits (130), Expect = 1e-21
Identities = 121/158 (77%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||||||||| || | || || || ||||| || | ||||| |||||
Sbjct 744582 AATGCAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTC 744641
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| || | || |||| | || ||||| ||||||||||| ||||| || || ||
Sbjct 744642 CGATACGATCGATAACGTGAAATCCAAGATTCAAGACAAGGAGGGTATTCCACCTGATCA 744701
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
||||||||| || |||||||| ||||| ||||| ||||
Sbjct 744702 GCAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATG 744739
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 27437 AGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTC 27496
|||| || || || || ||||| ||| ||||| || | || | ||| | || ||||
Sbjct 744074 AGACCATCACCCTCGAAGTTGAATCATCTGATACTATCGATAACGTCAAGTCCAAGATTC 744133
Query 27497 AGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCG 27556
| ||||||||||| || || || || || || ||||| || || || ||||| |||||||
Sbjct 744134 AAGACAAGGAGGGTATCCCACCTGATCAACAACGTCTCATCTTCGCGGGTAAACAACTCG 744193
Query 27557 AGGATGATCGTACCCT 27572
|||| | |||||| ||
Sbjct 744194 AGGACGGTCGTACTCT 744209
>seq5
Length=1209326
Score = 132 bits (146), Expect = 5e-26
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486
||||| || ||||| || || || ||||||||||| || | ||| | ||| | |||
Sbjct 1116928 CTTACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAG 1116869
Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546
| || || |||||||||||||| || || || || || ||| | | || || |||||
Sbjct 1116868 TCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGGC 1116809
Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606
||||| |||||||||| | | || ||| | || || || |||| ||||| || ||||||
Sbjct 1116808 AAGCAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCTT 1116749
Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632
||| | ||| | |||||||| |||||
Sbjct 1116748 CATTTGGTCCTCCGTCTTCGTGGTGG 1116723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309836818480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |