Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq8 131 1e-25
seq5 95.1 1e-14
>seq8
Length=1050647
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| |||| || || | || ||||| ||||| || | |||
Sbjct 744355 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAAACCATCACTCTCGAAGTCGAGTCTTCC 744414
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | || || || ||||||||||| ||||| || || || |||||
Sbjct 744415 GATACGATCGATAATGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTGATCAG 744474
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| |||||| | |||||| || || | ||||| ||||||
Sbjct 744475 CAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAAC 744534
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | ||||||||| | || | || ||||| ||
Sbjct 744535 ATCCAAAAGGAGTCTACACTTCATTTGGTTCTCCGACTTCGTGGTGGAAT 744584
Score = 84.2 bits (92), Expect = 2e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 27033 GAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGC 27092
|| || ||| | ||||| | || || | |||||| || |||||||| ||||||||
Sbjct 743661 GAGGTCGAATCTTCCGATACTATCGATAATGTCAAATCCAAGATTCAAGATAAAGAAGGT 743720
Query 27093 ATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGT 27146
|| ||||| |||||||| ||| | || | ||| || ||||||||||||||| ||
Sbjct 743721 ATCCCACCTGATCAACAACGTCTTATTTTCGCTGGTAAACAATTGGAAGACGGT 743774
>seq5
Length=1209326
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 27008 TCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAA 27067
||| || || ||| | || || || || || || | |||||| | || || | |||||
Sbjct 1116929 TCTTACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAA 1116870
Query 27068 ACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGG 27127
|| || || ||||| || || || ||||| ||||||||| | || || | ||| ||
Sbjct 1116869 GTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGG 1116810
Query 27128 CAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTT 27187
||| || | || || || ||| | || ||||||||||| || |||||||| || |
Sbjct 1116809 CAAGCAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCT 1116750
Query 27188 ACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||| | ||| | || |||||
Sbjct 1116749 TCATTTGGTCCTCCGTCTTCGTGGTGG 1116723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917970518080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |