Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq5 161 2e-34
seq8 113 1e-19
>seq5
Length=1209326
Score = 161 bits (178), Expect = 2e-34
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| | |||||||| ||||| || |||||||| ||||||| || ||
Sbjct 1116728 ACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGT 1116787
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| ||||| || ||||||||||| |||||||| | | ||||| ||||| || | ||
Sbjct 1116788 CCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACC 1116847
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || || || ||||||||||| || |||||||||||
Sbjct 1116848 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAG 1116907
Query 211073 AGTGATCGTCTTTCCCGTGAGA 211094
||||| ||||| || || |||
Sbjct 1116908 GGTGATGGTCTTACCTGTAAGA 1116929
>seq8
Length=1050647
Score = 113 bits (124), Expect = 1e-19
Identities = 158/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||||| || || | ||||| || ||||| ||||||||||| || || | || ||
Sbjct 744576 ACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGT 744517
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || ||||| || || || || ||||| || | | || || |||||||| | ||
Sbjct 744516 ACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACC 744457
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||| || ||||| || || || ||||| || || || || || |||||
Sbjct 744456 TTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAG 744397
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| || || || || | |||||| || || | |||||
Sbjct 744396 AGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355
Score = 89.7 bits (98), Expect = 1e-12
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 210948 AGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGA 211007
|| || | ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||
Sbjct 545221 AGAGTTCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGATCAGGTGGG 545162
Query 211008 ACTCCTTCCTTGTCCTGGATCT 211029
| || ||||||||||||||||
Sbjct 545161 ATACCCTCCTTGTCCTGGATCT 545140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159150826720835
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |