Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq5 161 2e-34 seq8 113 1e-19 >seq5 Length=1209326 Score = 161 bits (178), Expect = 2e-34 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| | |||||||| ||||| || |||||||| ||||||| || || Sbjct 1116728 ACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGT 1116787 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 ||| ||||| || ||||||||||| |||||||| | | ||||| ||||| || | || Sbjct 1116788 CCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACC 1116847 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || || || ||||||||||| || ||||||||||| Sbjct 1116848 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAG 1116907 Query 211073 AGTGATCGTCTTTCCCGTGAGA 211094 ||||| ||||| || || ||| Sbjct 1116908 GGTGATGGTCTTACCTGTAAGA 1116929 >seq8 Length=1050647 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||||| || || | ||||| || ||||| ||||||||||| || || | || || Sbjct 744576 ACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGT 744517 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||| || || || || ||||| || | | || || |||||||| | || Sbjct 744516 ACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACC 744457 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| || ||||| || || || ||||| || || || || || ||||| Sbjct 744456 TTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACTTCGAG 744397 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| || || || || | |||||| || || | ||||| Sbjct 744396 AGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355 Score = 89.7 bits (98), Expect = 1e-12 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 210948 AGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGA 211007 || || | ||||||||| ||||||||||| |||||||| || |||||||| ||||| || Sbjct 545221 AGAGTTCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGATCAGGTGGG 545162 Query 211008 ACTCCTTCCTTGTCCTGGATCT 211029 | || |||||||||||||||| Sbjct 545161 ATACCCTCCTTGTCCTGGATCT 545140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150826720835