Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 1e-23
>seq1
Length=2435598
Score = 125 bits (138), Expect = 1e-23
Identities = 276/411 (67%), Gaps = 2/411 (0%)
Strand=Plus/Minus
Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606
|| |||||||| |||| ||||||||||| | |||||| ||||| || | || || |
Sbjct 131150 AATCCAGGACACTCATGTGGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGC 131091
Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666
|| || ||||| || ||||| | || |||| ||| || | || | |||||| ||
Sbjct 131090 ATGAAAAGATCCGGGATCCACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTTA 131031
Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726
|| ||| ||| ||||| | || || | || || | |||||||| || || ||
Sbjct 131030 CCGTGATTTTTTCGTAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAA 130971
Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786
|| || | | |||| ||||| || ||||| || ||||| | |||| || || |
Sbjct 130970 ATGGCAAAAGCACCTGGTCGCTTGTTACCACCTTGATCGACGTATCGAGCGGTTGCGTCG 130911
Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTA-CCATTTGTTCCAGAAATATAACT 76845
||| ||| | ||| |||| || ||||| || ||| || ||||| |||| || |||
Sbjct 130910 TAAGCTCGAAGCATAGGAACGATACCGTTCGA-GTACCCGTTTGTACCAGCGATGTAAGA 130852
Query 76846 TCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905
|| |||||||| || ||| || || || || ||||| | || ||||| |
Sbjct 130851 ACCCTTGGCACGAATGTTGTGAATGTTGAGACCGATACCACCTGCTGTCTTGGAGATCAT 130792
Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT 76956
||||| ||| | || |||||||| || || || ||| ||| ||||
Sbjct 130791 GGCACAAGTTTTGAGAGTATCATAGATACCTTCGATGGAATCCTCCTTCAT 130741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712933695977280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |