Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq8 176 9e-39 seq5 129 1e-24 seq9 102 2e-16 seq34 87.8 4e-12 seq31 87.8 4e-12 >seq8 Length=1050647 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| ||| | || || ||||||||||||||||| | Sbjct 744581 CCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAG 744522 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || || |||||||| ||||| || ||||| | || || ||| || Sbjct 744521 AGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGG 744462 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| ||||||||||| ||||| | ||||| ||||||| || || |||| |||||| Sbjct 744461 ATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACT 744402 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| || ||||| ||||||||||| ||||| || ||||| Sbjct 744401 TCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355 Score = 125 bits (138), Expect = 1e-23 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 |||| |||| || || || || ||||| |||||||| || || ||||| | |||||||| Sbjct 744220 TGTAATCAGAGAGAGTACGACCGTCCTCGAGTTGTTTACCCGCGAAGATGAGACGTTGTT 744161 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 | ||| || ||||||||||||||||| ||||| | || ||| |||||||||| || | Sbjct 744160 GATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTATCGATAGTATCAG 744101 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCT 283068 | | ||| |||||||| ||||| |||| Sbjct 744100 ATGATTCAACTTCGAGGGTGATGGTCT 744074 Score = 120 bits (132), Expect = 6e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 |||| |||| | || | |||||| || || || || || |||||||| | ||| || | Sbjct 744760 TGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCT 744701 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 | ||| |||||||||||||||||||| ||||| | ||| ||| ||||||| || || | Sbjct 744700 GATCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACGTTATCGATCGTATCGG 744641 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| || || || | ||||| || || || |||||||| || || || || |||||| Sbjct 744640 AAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 744582 Score = 104 bits (114), Expect = 5e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 |||||||| | || ||||| ||||| ||||| | ||||| ||| |||||||| || Sbjct 743342 CCATCCTCCAACTGCTTCCCAGCAAAAATCAACCTCTGTTGATCAGGTGGAATACCTTCT 743283 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 || ||||| ||||||| ||| || ||||||| || || || | |||||||||||| ||| Sbjct 743282 TTATCTTGAATCTTTGATTTGACATTATCGATCGTATCTGATGATTCGACTTCGAGGGTG 743223 Query 283062 ATCGTCT 283068 || |||| Sbjct 743222 ATTGTCT 743216 >seq5 Length=1209326 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| ||| | || || || ||||||||||| || | Sbjct 1116722 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 1116781 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | |||||||| || || || || || |||||||| | ||||| ||| || Sbjct 1116782 TAGAGTCCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 1116841 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| ||||| |||| || || Sbjct 1116842 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1116901 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| |||||||| || Sbjct 1116902 CTCGAGGGTGATGGTCTTACCTGT 1116925 >seq9 Length=1075742 Score = 102 bits (112), Expect = 2e-16 Identities = 126/169 (75%), Gaps = 5/169 (3%) Strand=Plus/Minus Query 43974 TCGGATT-TGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAA 44032 || |||| | |||||| || || ||||| | || || |||||||||||||| |||||| Sbjct 362145 TCAGATTCTACCAAGCTTCTACGTCGGAACTCTATGGCAAGGTTCAGGAGATACCTCAAT 362086 Query 44033 CAGAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATT 44092 | || | || ||||||||||| ||||||| ||||| || || ||||| ||||| || | Sbjct 362085 CTGAGACTACACCGTTTTATCCGAGGAGTCCGTATGGAGTCGCAAAGCTGTATGCATACT 362026 Query 44093 GGAT--TTGTAAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAAT 44139 |||| |||| || || | || ||||| || |||| | ||| ||| Sbjct 362025 GGATCGTTGT--CAACTACAGGGAATCGTACGGAATGTATGCTTGCAAT 361979 >seq34 Length=15758 Score = 87.8 bits (96), Expect = 4e-12 Identities = 111/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 43983 CCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGAC 44042 ||| || || || |||||| | ||||| |||| |||| || || | || | ||| Sbjct 15033 CCAGGCTTCCACGTCGGAGCTCTACGGTCAGGTCGTCGAGACGCCCCAGAGTGAGACGAC 14974 Query 44043 TCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGAT--TTGT 44100 ||||||||||| |||||||||||||||| || ||||| ||||| || ||||| | || Sbjct 14973 ACCGTTTTATCCGAGGAGTCCATATGGTGTCGCCAAGCTGTATGCGTACTGGATCGTCGT 14914 Query 44101 AAAAATTATCGCGAGTCGTATGGGATGTTCG 44131 || || | |||||||| || ||||||| Sbjct 14913 --CAACTACAGGGAGTCGTACGGCATGTTCG 14885 >seq31 Length=21528 Score = 87.8 bits (96), Expect = 4e-12 Identities = 111/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 43983 CCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGAC 44042 ||| || || || |||||| | ||||| |||| |||| || || | || | ||| Sbjct 3721 CCAGGCTTCCACGTCGGAGCTCTACGGTCAGGTCGTCGAGACGCCCCAGAGTGAGACGAC 3780 Query 44043 TCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGAT--TTGT 44100 ||||||||||| |||||||||||||||| || ||||| ||||| || ||||| | || Sbjct 3781 ACCGTTTTATCCGAGGAGTCCATATGGTGTCGCCAAGCTGTATGCGTACTGGATCGTCGT 3840 Query 44101 AAAAATTATCGCGAGTCGTATGGGATGTTCG 44131 || || | |||||||| || ||||||| Sbjct 3841 --CAACTACAGGGAGTCGTACGGCATGTTCG 3869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738140503666