Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq5 129 1e-24
seq8 123 6e-23
>seq5
Length=1209326
Score = 129 bits (142), Expect = 1e-24
Identities = 139/184 (76%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 177941 TCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAA 178000
||| ||||| || || |||||||||||||| || || ||||||||||| || |||||
Sbjct 1116929 TCTTACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAA 1116870
Query 178001 ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGG 178060
||||| |||||||| || || ||||| || || || || | | |||||||| ||
Sbjct 1116869 GTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGG 1116810
Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACT 178120
|| |||||||| ||||| |||||||| | ||||| ||| |||| || || || || ||
Sbjct 1116809 CAAGCAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCT 1116750
Query 178121 GCAT 178124
|||
Sbjct 1116749 TCAT 1116746
>seq8
Length=1050647
Score = 123 bits (136), Expect = 6e-23
Identities = 124/161 (77%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || |||||| | ||||| ||||| ||||| | ||||| || || ||
Sbjct 744586 CAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTCCGAT 744645
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| ||| |||||||| ||||| || || || || || || |||||
Sbjct 744646 ACGATCGATAACGTGAAATCCAAGATTCAAGACAAGGAGGGTATTCCACCTGATCAGCAG 744705
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGAC 178084
|| |||||||| || ||||| |||||||||||||| |||||
Sbjct 744706 CGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGGCAGGAC 744746
Score = 100 bits (110), Expect = 7e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 177954 ACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAG 178013
|| ||||||||||| || ||| || || || ||||| |||||||| ||||||||
Sbjct 744076 ACCATCACCCTCGAAGTTGAATCATCTGATACTATCGATAACGTCAAGTCCAAGATTCAA 744135
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| || || ||||| || || || ||||| || |||||||| || ||||| |||||
Sbjct 744136 GACAAGGAGGGTATCCCACCTGATCAACAACGTCTCATCTTCGCGGGTAAACAACTCGAG 744195
Query 178074 GATGGAAGGACTCTTGCCGATTA 178096
|| || | ||||| | |||||
Sbjct 744196 GACGGTCGTACTCTCTCTGATTA 744218
Score = 87.8 bits (96), Expect = 4e-12
Identities = 74/91 (81%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065
|||| |||||||| || || ||||| || || || ||||| || ||||||||||| || |
Sbjct 545140 AGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAACGTCTCATCTTCGCCGGCAAGC 545199
Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096
|||||||||||||| | ||||| |||| ||
Sbjct 545200 AGCTCGAAGATGGACGAACTCTCTCCGACTA 545230
Score = 84.2 bits (92), Expect = 5e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 177954 ACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAG 178013
|| ||||||||||| || ||| ||||| || ||||| || |||||| |||||||||
Sbjct 743218 ACAATCACCCTCGAAGTCGAATCATCAGATACGATCGATAATGTCAAATCAAAGATTCAA 743277
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
|| |||||||| || || || || || || | | || || || || || ||| | ||
Sbjct 743278 GATAAAGAAGGTATTCCACCTGATCAACAGAGGTTGATTTTTGCTGGGAAGCAGTTGGAG 743337
Query 178074 GATGGAAGGAC 178084
||||| |||||
Sbjct 743338 GATGGGAGGAC 743348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203729981598326
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |