Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq8 104 4e-17 >seq8 Length=789079 Score = 104 bits (114), Expect = 4e-17 Identities = 241/360 (67%), Gaps = 5/360 (1%) Strand=Plus/Minus Query 205610 CATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattt 205669 || || |||||||||| |||| || || || | ||| || |||||| | |||| Sbjct 612177 CACCTTTAGGATTCCAAGCTGACAAAATGATCCTCCTATCCGTTGGATTATTTCTAATTT 612118 Query 205670 tatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATC-CATATCA 205728 | | |||| || | |||||||| | |||| | |||||| ||| || || Sbjct 612117 TTTCAATAACCTGCGCCAATTGATCCACCCCTTTCCCTCTATAATCATCATCACAAGTCC 612058 Query 205729 ATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCT 205788 ||||| || || ||||| | ||||||||| ||||||||||| || | |||||||| | Sbjct 612057 C-ATATTCTGCTCCGAAATGTCTCCATTGAAATCCATAAACTGGTCCAAGATCACCTTGT 611999 Query 205789 TTTCTATCATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaata 205848 ||||||| || || ||| ||| | | ||| | | |||||| |||||||||| Sbjct 611998 CTTCTATCTTTCAATCCAACTTTATCCAAATACTCTCTACTTCCATTCCCATCCCAAATC 611939 Query 205849 tggattcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAAT 205908 |||||| || || | ||| || ||||| || |||||||| | |||| Sbjct 611938 CCAATTCCTAAATCCGATAATAAATTCCCATCTGTTGAACCCCGAATAAACCAAAGTAAT 611879 Query 205909 TCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAA---TGAATCA 205965 |||||||||| || | | || | | ||| || || | |||||| || ||||||| Sbjct 611878 TCTTCAACAACACCACGTAAGAAAACTCTTTTAGTAGTGAGTAATGGGAAAGTTGAATCA 611819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755454526860800