Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq8 104 4e-17
>seq8
Length=789079
Score = 104 bits (114), Expect = 4e-17
Identities = 241/360 (67%), Gaps = 5/360 (1%)
Strand=Plus/Minus
Query 205610 CATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattt 205669
|| || |||||||||| |||| || || || | ||| || |||||| | ||||
Sbjct 612177 CACCTTTAGGATTCCAAGCTGACAAAATGATCCTCCTATCCGTTGGATTATTTCTAATTT 612118
Query 205670 tatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATC-CATATCA 205728
| | |||| || | |||||||| | |||| | |||||| ||| || ||
Sbjct 612117 TTTCAATAACCTGCGCCAATTGATCCACCCCTTTCCCTCTATAATCATCATCACAAGTCC 612058
Query 205729 ATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCT 205788
||||| || || ||||| | ||||||||| ||||||||||| || | |||||||| |
Sbjct 612057 C-ATATTCTGCTCCGAAATGTCTCCATTGAAATCCATAAACTGGTCCAAGATCACCTTGT 611999
Query 205789 TTTCTATCATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaata 205848
||||||| || || ||| ||| | | ||| | | |||||| ||||||||||
Sbjct 611998 CTTCTATCTTTCAATCCAACTTTATCCAAATACTCTCTACTTCCATTCCCATCCCAAATC 611939
Query 205849 tggattcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAAT 205908
|||||| || || | ||| || ||||| || |||||||| | ||||
Sbjct 611938 CCAATTCCTAAATCCGATAATAAATTCCCATCTGTTGAACCCCGAATAAACCAAAGTAAT 611879
Query 205909 TCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAA---TGAATCA 205965
|||||||||| || | | || | | ||| || || | |||||| || |||||||
Sbjct 611878 TCTTCAACAACACCACGTAAGAAAACTCTTTTAGTAGTGAGTAATGGGAAAGTTGAATCA 611819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755454526860800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |