Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq10 199 4e-46 seq1 96.9 3e-15 >seq10 Length=738709 Score = 199 bits (220), Expect = 4e-46 Identities = 299/421 (71%), Gaps = 4/421 (1%) Strand=Plus/Plus Query 23312 GGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATC 23371 |||||||| | | |||| | || | ||| || || | ||| ||||||||||| ||| Sbjct 610506 GGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATC 610565 Query 23372 CATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTC--A 23429 || | |||||||| | || || || || || || ||||| || ||| | |||||| | Sbjct 610566 CACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACC-GTGAT-TTTTTCGTA 610623 Query 23430 AATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCG 23489 ||| | |||||| || ||||| || ||||| ||||||||||||| |||||| || || | Sbjct 610624 GATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTG 610683 Query 23490 GTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCG 23549 ||| ||| || || || |||||||||||||| || || || ||| ||| ||||| | Sbjct 610684 GTCGCTTGTTACCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAG 610743 Query 23550 GCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGT 23609 | |||| |||||| || ||| | || || | ||||| || || |||| || Sbjct 610744 GAACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGT 610803 Query 23610 TGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAG 23669 |||||| || || ||| || || || | | || || ||||| || || ||| |||| Sbjct 610804 TGTGAATGTTGAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAG 610863 Query 23670 TGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTT 23729 | || ||||| || |||||| ||||| || |||||| | |||||| || || | || Sbjct 610864 TATCATAGATACCTTCGATGGAATCCTCCTTCATCGCGATGAGGAAACATGACGAAAGTT 610923 Query 23730 G 23730 | Sbjct 610924 G 610924 Score = 114 bits (126), Expect = 1e-20 Identities = 277/419 (66%), Gaps = 3/419 (1%) Strand=Plus/Plus Query 22457 ACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCG 22516 || ||||| ||||| || | | || || || || |||||| ||| | || ||| Sbjct 609541 ACGACTTGGAACTCTCCAGCGAGCACACGACGAGTATAGATGTTGCTGGTGTAAGGCTCG 609600 Query 22517 AAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGT 22576 || | ||||| |||||| ||||||| ||||| ||||| ||||||||||| | ||| Sbjct 609601 AAGCACTCATTCCATCCCAGGATCTGAGAAGTCGACGCGGTAGGCATCGGCGCGACCAGG 609660 Query 22577 AGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGA 22636 || |||||||||| ||||| || | || || |||||| ||||||||||||| || Sbjct 609661 AGGGAGTTTCTCAGACCGTGTTTGGCGATGTTGGCCTTGAGAGTCGACCAGTCCCAGAGT 609720 Query 22637 TCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTG 22696 || ||| || | | |||||| ||| |||||| | ||| || || || Sbjct 609721 GAGGTCGGGGT---AATACCCCACAGGTCGAATTGCAGCCTGCCCTCGCTGGCAGGAGAT 609777 Query 22697 CCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCG 22756 ||| ||| || ||| |||| | ||| | ||||| ||||| | || | || Sbjct 609778 CCTGGGTAAGTCAGGTAGTGACCCTCAATCTCAGCAAGCTCGCAAGAAGATTCAAGAGCT 609837 Query 22757 CCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTAC 22816 ||| || || ||||| ||||| || ||| | ||| ||| || ||| | Sbjct 609838 GCGTGGTAAATGGTCTCAAAGATCTTGAGGTTGAGTTCCCGGGCCTGAGGGCCATCGAAT 609897 Query 22817 GGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCG 22875 |||||||| | || ||| || || || | ||| |||||||| | ||| | ||||| Sbjct 609898 GGCATACGGAGAGCCATGAATGCATCGGCGAGACCTTGAACGCCGAGACCAACGGGTCG 609956 >seq1 Length=1746732 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||| ||||||| ||||| ||||| |||| || || | ||| Sbjct 1066762 ATGCAAATCTTCGTCAAGACTTTGACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCC 1066703 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || | || ||||||||||| | || || || ||| Sbjct 1066702 GATACGATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTGATCAG 1066643 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||| || ||||| | |||||| | ||| | ||| || ||| Sbjct 1066642 CAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAAC 1066583 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 || ||||| || || || |||||| |||| || |||| Sbjct 1066582 ATCCAAAAGGAGTCTACACTTCATTTGGTTCTCCGACT 1066545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765530755520