Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq10 199 4e-46
seq1 96.9 3e-15
>seq10
Length=738709
Score = 199 bits (220), Expect = 4e-46
Identities = 299/421 (71%), Gaps = 4/421 (1%)
Strand=Plus/Plus
Query 23312 GGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATC 23371
|||||||| | | |||| | || | ||| || || | ||| ||||||||||| |||
Sbjct 610506 GGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATC 610565
Query 23372 CATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTC--A 23429
|| | |||||||| | || || || || || || ||||| || ||| | |||||| |
Sbjct 610566 CACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACC-GTGAT-TTTTTCGTA 610623
Query 23430 AATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCG 23489
||| | |||||| || ||||| || ||||| ||||||||||||| |||||| || || |
Sbjct 610624 GATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTG 610683
Query 23490 GTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCG 23549
||| ||| || || || |||||||||||||| || || || ||| ||| ||||| |
Sbjct 610684 GTCGCTTGTTACCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAG 610743
Query 23550 GCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGT 23609
| |||| |||||| || ||| | || || | ||||| || || |||| ||
Sbjct 610744 GAACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGT 610803
Query 23610 TGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAG 23669
|||||| || || ||| || || || | | || || ||||| || || ||| ||||
Sbjct 610804 TGTGAATGTTGAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAG 610863
Query 23670 TGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTT 23729
| || ||||| || |||||| ||||| || |||||| | |||||| || || | ||
Sbjct 610864 TATCATAGATACCTTCGATGGAATCCTCCTTCATCGCGATGAGGAAACATGACGAAAGTT 610923
Query 23730 G 23730
|
Sbjct 610924 G 610924
Score = 114 bits (126), Expect = 1e-20
Identities = 277/419 (66%), Gaps = 3/419 (1%)
Strand=Plus/Plus
Query 22457 ACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCG 22516
|| ||||| ||||| || | | || || || || |||||| ||| | || |||
Sbjct 609541 ACGACTTGGAACTCTCCAGCGAGCACACGACGAGTATAGATGTTGCTGGTGTAAGGCTCG 609600
Query 22517 AAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGT 22576
|| | ||||| |||||| ||||||| ||||| ||||| ||||||||||| | |||
Sbjct 609601 AAGCACTCATTCCATCCCAGGATCTGAGAAGTCGACGCGGTAGGCATCGGCGCGACCAGG 609660
Query 22577 AGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGA 22636
|| |||||||||| ||||| || | || || |||||| ||||||||||||| ||
Sbjct 609661 AGGGAGTTTCTCAGACCGTGTTTGGCGATGTTGGCCTTGAGAGTCGACCAGTCCCAGAGT 609720
Query 22637 TCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTG 22696
|| ||| || | | |||||| ||| |||||| | ||| || || ||
Sbjct 609721 GAGGTCGGGGT---AATACCCCACAGGTCGAATTGCAGCCTGCCCTCGCTGGCAGGAGAT 609777
Query 22697 CCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCG 22756
||| ||| || ||| |||| | ||| | ||||| ||||| | || | ||
Sbjct 609778 CCTGGGTAAGTCAGGTAGTGACCCTCAATCTCAGCAAGCTCGCAAGAAGATTCAAGAGCT 609837
Query 22757 CCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTAC 22816
||| || || ||||| ||||| || ||| | ||| ||| || ||| |
Sbjct 609838 GCGTGGTAAATGGTCTCAAAGATCTTGAGGTTGAGTTCCCGGGCCTGAGGGCCATCGAAT 609897
Query 22817 GGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCG 22875
|||||||| | || ||| || || || | ||| |||||||| | ||| | |||||
Sbjct 609898 GGCATACGGAGAGCCATGAATGCATCGGCGAGACCTTGAACGCCGAGACCAACGGGTCG 609956
>seq1
Length=1746732
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||| ||||||| ||||| ||||| |||| || || | |||
Sbjct 1066762 ATGCAAATCTTCGTCAAGACTTTGACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCC 1066703
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || | || ||||||||||| | || || || |||
Sbjct 1066702 GATACGATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTGATCAG 1066643
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || ||||| || ||||| | |||||| | ||| | ||| || |||
Sbjct 1066642 CAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAAC 1066583
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|| ||||| || || || |||||| |||| || ||||
Sbjct 1066582 ATCCAAAAGGAGTCTACACTTCATTTGGTTCTCCGACT 1066545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765530755520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |