Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq10 136 5e-27 >seq10 Length=738709 Score = 136 bits (150), Expect = 5e-27 Identities = 370/564 (66%), Gaps = 2/564 (0%) Strand=Plus/Plus Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 || || || ||||| ||||||||| |||||| ||| |||| | ||| | ||| || | | Sbjct 610335 GCGTCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 610394 Query 63123 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTA-TA 63181 |||| | | || || || || |||| | | | || |||||| || | || Sbjct 610395 CAGAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTAT-GACTCGTA 610453 Query 63182 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACAT 63241 | | ||||| | | ||| | || | |||||| |||||| |||| |||||||| Sbjct 610454 TAGTTCATCGAAAGCCTTTCCATGACAATCGGCCAATCCAGGACACTCATGTGGACACAT 610513 Query 63242 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63301 ||| | ||||||||| || || | || || ||| || ||||| || ||||| | || Sbjct 610514 CAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGC 610573 Query 63302 TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63361 |||| ||| | | || | ||| || || || ||| ||| ||||||| || Sbjct 610574 GTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAA 610633 Query 63362 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63421 | | || || | ||||| || || | ||| ||||| | | || || || ||||| Sbjct 610634 GTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTGGTCGCTTGTT 610693 Query 63422 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63481 || || ||||| | ||| | |||||| | ||| ||| | ||| |||| ||||| Sbjct 610694 ACCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACC 610753 Query 63482 GTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGA 63541 ||| || || || ||||| | ||| || || |||||||||| || ||| Sbjct 610754 GTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATGTT 610813 Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601 ||||| || || ||||| | || ||||| | || || ||| | || |||||||| Sbjct 610814 GAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGAT 610873 Query 63602 GCCTTCTATGCTATCATCGATCAT 63625 ||||| ||| ||| || |||| Sbjct 610874 ACCTTCGATGGAATCCTCCTTCAT 610897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816371855680