Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq10 125 9e-24 >seq10 Length=738709 Score = 125 bits (138), Expect = 9e-24 Identities = 372/566 (66%), Gaps = 6/566 (1%) Strand=Plus/Plus Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 || || || ||||| ||||||||| |||||| ||| |||| | ||| | ||| || | | Sbjct 610335 GCGTCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 610394 Query 65916 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTAT-AGT-GTAT 65973 |||| | | || || || || |||| | | || |||||| | | |||| Sbjct 610395 CAGAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTATGACTCGTAT 610454 Query 65974 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 66033 | || | |||| | | ||| | || | ||||||||||||| |||| ||||||| Sbjct 610455 AGT-TCAT-CGAAAGCCTTTCCATGACAATCGGCCAATCCAGGACACTCATGTGGACACA 610512 Query 66034 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 66093 |||| | ||||||||| || || | || || ||| || ||||| || ||||| | | Sbjct 610513 TCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACG 610572 Query 66094 CTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 66153 | |||||||| | | || | ||| || || || ||| ||| ||||||| | Sbjct 610573 CGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAA 610632 Query 66154 ACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 66213 | | | || || ||||| || || | ||| ||||| | | || || || |||| Sbjct 610633 AGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTGGTCGCTTGT 610692 Query 66214 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 66273 | || || ||||| | ||| | |||||| | ||| ||| | ||| |||| |||| Sbjct 610693 TACCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATAC 610752 Query 66274 CATTGGATGTA-CCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATT 66332 | || || ||| || || || || | ||| || || | |||||||| || ||| Sbjct 610753 CGTTCGA-GTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATG 610811 Query 66333 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 66392 ||||| || || ||||| | || ||||| | || || ||| | ||||||||| Sbjct 610812 TTGAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAG 610871 Query 66393 ATGCCCTCTATACTATCATCCATCAT 66418 || || || || ||| ||| |||| Sbjct 610872 ATACCTTCGATGGAATCCTCCTTCAT 610897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171516563040