Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq10 136 6e-27 >seq10 Length=738709 Score = 136 bits (150), Expect = 6e-27 Identities = 370/564 (66%), Gaps = 2/564 (0%) Strand=Plus/Plus Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 || || || ||||| ||||| ||| |||||| ||| |||| | ||| | ||| || | | Sbjct 610335 GCGTCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 610394 Query 79795 CAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATAT 79854 |||| | | || || || || | |||| | | || |||||| ||| Sbjct 610395 CAGAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTATGACTCGTAT 610454 Query 79855 AATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914 | | ||||| | | ||| | |||| | ||||||||||| || | ||||||||| Sbjct 610455 AGTTCATCGAAAGCCTTTCCATGACAATCGGCCAATCCAGGACACTCATGTGGACACATC 610514 Query 79915 AACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 79974 || | |||||||||||| || | ||| || ||| || ||||| || ||||| | || Sbjct 610515 AAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGCG 610574 Query 79975 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 80034 |||| ||| | | || | || || || || ||| ||| ||||||| || Sbjct 610575 TAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAAG 610634 Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094 | | || || | ||||| || || | ||| ||||| | | || ||||| ||||| Sbjct 610635 TCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTGGTCGCTTGTTA 610694 Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 || || ||||| | ||| | |||||| | ||| ||| | ||| |||| ||||| Sbjct 610695 CCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACCG 610754 Query 80155 TTGGATGTA-CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 || || ||| || || || || | ||| || || |||||||||| || ||| Sbjct 610755 TTCGA-GTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATGTT 610813 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 ||||| || || ||||| | || ||||| | || || ||| | ||||||||||| Sbjct 610814 GAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGAT 610873 Query 80274 GCCCTCTATGCTATCATCAATCAT 80297 || || ||| ||| || |||| Sbjct 610874 ACCTTCGATGGAATCCTCCTTCAT 610897 Score = 100 bits (110), Expect = 4e-16 Identities = 94/117 (80%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 80674 ACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCT 80733 || |||||||| | |||||| || |||||||| | ||||| | ||| |||| || ||| Sbjct 611640 ACCTCACTAAACACTTTTTTAGTCTCCTTGTGCAAGTTTGAAATGGCGATTCGAGCTGCT 611699 Query 80734 AAAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAG 80789 ||||| |||||||||||||||| || || ||||| |||||| |||||||||| || Sbjct 611700 AAAATCGCATAATCTGGATGTTTGGTTGT-CAAGTATGCTGCTGTTTCGGCTGCGAG 611755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267399375840