Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq10 136 5e-27 >seq10 Length=738709 Score = 136 bits (150), Expect = 5e-27 Identities = 368/563 (65%), Gaps = 0/563 (0%) Strand=Plus/Plus Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877 || || || ||||| || || ||| |||||| ||| |||| | ||| | ||| || | | Sbjct 610335 GCGTCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 610394 Query 71878 CAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATAT 71937 |||| | | || || || || ||| |||| | | || |||||| ||| Sbjct 610395 CAGAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTATGACTCGTAT 610454 Query 71938 AATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATC 71997 | | ||||| | | ||| | || | | ||||||||||| |||| ||||||||| Sbjct 610455 AGTTCATCGAAAGCCTTTCCATGACAATCGGCCAATCCAGGACACTCATGTGGACACATC 610514 Query 71998 AATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 72057 || | |||||||||||| || | ||| || ||| || ||||| || ||||| | || Sbjct 610515 AAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGCG 610574 Query 72058 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 72117 |||| ||| | | || | || || || || ||| ||| ||||||| || Sbjct 610575 TAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAAG 610634 Query 72118 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTT 72177 | | || || | ||||| || || | ||| ||||| | | || || || ||||| Sbjct 610635 TCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTGGTCGCTTGTTA 610694 Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237 || || ||||| | ||| | |||||| | ||| ||| | ||| |||| ||||| Sbjct 610695 CCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACCG 610754 Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297 || || || || || || | ||| || || |||||||||| ||| ||| Sbjct 610755 TTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATGTTG 610814 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 ||||| || || ||||| | || ||||| | || || ||| | ||||||||||| Sbjct 610815 AGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGATA 610874 Query 72358 CCCTCTATACTATCATCCATCAT 72380 || || || ||| ||| |||| Sbjct 610875 CCTTCGATGGAATCCTCCTTCAT 610897 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/117 (79%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 72757 ACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCT 72816 || |||||||| | |||||| || |||||||| | ||||| | ||| |||| || ||| Sbjct 611640 ACCTCACTAAACACTTTTTTAGTCTCCTTGTGCAAGTTTGAAATGGCGATTCGAGCTGCT 611699 Query 72817 AGAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCTGCTGCCAG 72872 | ||| |||||||||||||||| || || ||||| |||||| |||| ||||| || Sbjct 611700 AAAATCGCATAATCTGGATGTTTGGTTGT-CAAGTATGCTGCTGTTTCGGCTGCGAG 611755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137891278560