Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq10 136 5e-27
>seq10
Length=738709
Score = 136 bits (150), Expect = 5e-27
Identities = 368/563 (65%), Gaps = 0/563 (0%)
Strand=Plus/Plus
Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877
|| || || ||||| || || ||| |||||| ||| |||| | ||| | ||| || | |
Sbjct 610335 GCGTCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 610394
Query 71878 CAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATAT 71937
|||| | | || || || || ||| |||| | | || |||||| |||
Sbjct 610395 CAGAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTATGACTCGTAT 610454
Query 71938 AATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATC 71997
| | ||||| | | ||| | || | | ||||||||||| |||| |||||||||
Sbjct 610455 AGTTCATCGAAAGCCTTTCCATGACAATCGGCCAATCCAGGACACTCATGTGGACACATC 610514
Query 71998 AATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 72057
|| | |||||||||||| || | ||| || ||| || ||||| || ||||| | ||
Sbjct 610515 AAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGCG 610574
Query 72058 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 72117
|||| ||| | | || | || || || || ||| ||| ||||||| ||
Sbjct 610575 TAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAAG 610634
Query 72118 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTT 72177
| | || || | ||||| || || | ||| ||||| | | || || || |||||
Sbjct 610635 TCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTGGTCGCTTGTTA 610694
Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237
|| || ||||| | ||| | |||||| | ||| ||| | ||| |||| |||||
Sbjct 610695 CCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACCG 610754
Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297
|| || || || || || | ||| || || |||||||||| ||| |||
Sbjct 610755 TTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATGTTG 610814
Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357
||||| || || ||||| | || ||||| | || || ||| | |||||||||||
Sbjct 610815 AGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGATA 610874
Query 72358 CCCTCTATACTATCATCCATCAT 72380
|| || || ||| ||| ||||
Sbjct 610875 CCTTCGATGGAATCCTCCTTCAT 610897
Score = 91.5 bits (100), Expect = 2e-13
Identities = 92/117 (79%), Gaps = 2/117 (2%)
Strand=Plus/Plus
Query 72757 ACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCT 72816
|| |||||||| | |||||| || |||||||| | ||||| | ||| |||| || |||
Sbjct 611640 ACCTCACTAAACACTTTTTTAGTCTCCTTGTGCAAGTTTGAAATGGCGATTCGAGCTGCT 611699
Query 72817 AGAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCTGCTGCCAG 72872
| ||| |||||||||||||||| || || ||||| |||||| |||| ||||| ||
Sbjct 611700 AAAATCGCATAATCTGGATGTTTGGTTGT-CAAGTATGCTGCTGTTTCGGCTGCGAG 611755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671137891278560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |