Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq1 86.0 5e-12
>seq1
Length=1746732
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904
|||||||||||||| || ||||| || | | || |||| || || ||||||||
Sbjct 1066566 GTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCGAGTTGTTTACCG 1066625
Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964
|| |||| | ||||||||||| || | || || ||||| ||| || |||
Sbjct 1066626 GCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGAATCTTGGACTTT 1066685
Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024
|| | ||| |||||| || ||| ||||| || || ||||| ||||| |||||
Sbjct 1066686 ACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATAGTTTTCCCTGTCAAAGTC 1066745
Query 19025 TTGACAAAAATTTGCAT 19041
||||| || ||||||||
Sbjct 1066746 TTGACGAAGATTTGCAT 1066762
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 18864 TGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCT 18923
||||||| | || ||| || | || || ||||| || || ||| | ||||| | |||||
Sbjct 1066357 TGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCT 1066416
Query 18924 GATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGC 18983
|||| || | ||||| ||||| ||| || ||| || | ||| ||||||
Sbjct 1066417 GATCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGG 1066476
Query 18984 CAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042
|| ||| || | || || ||||| ||||| |||||||||||||| |||||||||
Sbjct 1066477 AAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414572011793464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |