Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 5e-12 >seq1 Length=1746732 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 |||||||||||||| || ||||| || | | || |||| || || |||||||| Sbjct 1066566 GTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCGAGTTGTTTACCG 1066625 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 || |||| | ||||||||||| || | || || ||||| ||| || ||| Sbjct 1066626 GCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGAATCTTGGACTTT 1066685 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | ||| |||||| || ||| ||||| || || ||||| ||||| ||||| Sbjct 1066686 ACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATAGTTTTCCCTGTCAAAGTC 1066745 Query 19025 TTGACAAAAATTTGCAT 19041 ||||| || |||||||| Sbjct 1066746 TTGACGAAGATTTGCAT 1066762 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 18864 TGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCT 18923 ||||||| | || ||| || | || || ||||| || || ||| | ||||| | ||||| Sbjct 1066357 TGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCT 1066416 Query 18924 GATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGC 18983 |||| || | ||||| ||||| ||| || ||| || | ||| |||||| Sbjct 1066417 GATCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGG 1066476 Query 18984 CAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || ||| || | || || ||||| ||||| |||||||||||||| ||||||||| Sbjct 1066477 AAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572011793464