Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 9e-27
seq13 129 1e-24
>seq1
Length=1746732
Score = 136 bits (150), Expect = 9e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | || || | ||| | |||||| || || || || || |||||
Sbjct 1066533 ATTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCG 1066592
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||| | ||||||||| |||||||| || || ||||| | |||||| |||||||||
Sbjct 1066593 GAGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGA 1066652
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||| | ||||| || || | |||||| || ||
Sbjct 1066653 GGGATACCTTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCG 1066712
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || ||||| || || || | || || || || || |||||
Sbjct 1066713 ACTTCGAGAGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762
Score = 113 bits (124), Expect = 1e-19
Identities = 131/177 (74%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443
|| ||||| | || || || ||||| || || ||||||||||| || || | ||| |||
Sbjct 1066359 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 1066418
Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503
||||| || || || || || || |||||||| | ||| ||||| || | |||||| |
Sbjct 1066419 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGGAA 1066478
Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
| |||||||| | || ||||| || || || | ||||| ||||| || ||||||
Sbjct 1066479 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535
>seq13
Length=658505
Score = 129 bits (142), Expect = 1e-24
Identities = 134/176 (76%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||| || || || || |||||||| ||||| || || || || ||||||
Sbjct 563839 GTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTCCTACCATCCTCGAGCTGCTTTCCA 563898
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | ||||||||||||||| || || || || || ||||| ||||| | ||
Sbjct 563899 GCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 563958
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAG 104538
||||| || | ||| ||| || || ||||| || || || |||||||| |||||
Sbjct 563959 ACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTACCTGTAAG 564014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151396098642448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |