Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq10 140 4e-28 >seq10 Length=738709 Score = 140 bits (154), Expect = 4e-28 Identities = 373/565 (66%), Gaps = 4/565 (1%) Strand=Plus/Plus Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071 || || || ||||| ||||||||| |||||| ||| |||| | ||| | ||| || | | Sbjct 610335 GCGTCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 610394 Query 63072 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTAT-AGT-GTAT 63129 |||| | | || || || || |||| | | | || |||||| | | |||| Sbjct 610395 CAGAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTATGACTCGTAT 610454 Query 63130 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 63189 | || | |||| | | ||| | || | ||||||||||||| |||| ||||||| Sbjct 610455 AGT-TCAT-CGAAAGCCTTTCCATGACAATCGGCCAATCCAGGACACTCATGTGGACACA 610512 Query 63190 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63249 |||| | ||||||||| || || | || || ||| || ||||| || ||||| | | Sbjct 610513 TCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACG 610572 Query 63250 CTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 63309 | |||| ||| | | || | ||| || || || ||| ||| ||||||| | Sbjct 610573 CGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAA 610632 Query 63310 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 63369 | | | || || | ||||| || || | ||| ||||| | | || || || |||| Sbjct 610633 AGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTGGTCGCTTGT 610692 Query 63370 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 63429 | || || ||||| | ||| | |||||| | ||| ||| | ||| |||| |||| Sbjct 610693 TACCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATAC 610752 Query 63430 CGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 63489 |||| || || || ||||| | ||| || || |||||||||| || ||| Sbjct 610753 CGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATGT 610812 Query 63490 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGA 63549 ||||| || || ||||| | || ||||| | || || ||| | || ||||||| Sbjct 610813 TGAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGA 610872 Query 63550 TACCCTCTATGCTATCATCGATCAT 63574 |||| || ||| ||| || |||| Sbjct 610873 TACCTTCGATGGAATCCTCCTTCAT 610897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945985252960