Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
seq10 91.5 1e-13
seq13 86.0 6e-12
>seq1
Length=1746732
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || ||||| | || ||||||||||| |||||||| |||
Sbjct 1066536 CCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAG 1066595
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| || || || || || ||| | || || | |||||| || ||||||
Sbjct 1066596 AGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGG 1066655
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || || ||| | | || | ||||||| |||||||
Sbjct 1066656 ATACCTTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACT 1066715
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||||| || || | ||| || ||||| || |||||
Sbjct 1066716 TCGAGAGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762
>seq10
Length=738709
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 145061 ACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGTTCA 145120
||||| || ||||| || || | ||||||||| ||| | ||| ||| | || ||
Sbjct 609541 ACGACTTGGAACTCTCCAGCGAGCACACGACGAGTATAGATGTTGCTGGTGTAAGGCTCG 609600
Query 145121 AAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACCAAT 145180
|| |||| || |||||||| |||| |||| ||||| ||||| ||| ||||
Sbjct 609601 AAGCACTCATTCCATCCCAGGATCTGAGAAGTCGACGCGGTAGGCATCGGCGCGACCAGG 609660
Query 145181 AATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCATAGC 145240
| || || | ||| ||||| || ||||| |||| || || ||| ||||| ||
Sbjct 609661 AGGGAGTTTCTCAGACCGTGTTTGGCGATGTTGGCCTTGAGAGTCGACCAGTCCCAGAGT 609720
Query 145241 GAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGG 145293
|| ||||| | | |||||| |||| | |||| ||||||||||||| ||
Sbjct 609721 GAGGTCGGGGTAATACCCCACAGGTCGAATTGCAGCCTGCCCTCGCTGGCAGG 609773
>seq13
Length=658505
Score = 86.0 bits (94), Expect = 6e-12
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || ||||| | || |||||||| || |||||||||||
Sbjct 563809 CCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGAT 563868
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || | ||||| |||||||| || ||| |||| || | ||| || || || |||
Sbjct 563869 AGAGTCCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGG 563928
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 563929 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 563988
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGA 131214
|||| ||| | ||| ||||| || |||
Sbjct 563989 TCGAGGGTGATGGTCTTACCTGTAAGA 564015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011879575040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |