Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 129 5e-25 >seq1 Length=1746732 Score = 129 bits (142), Expect = 5e-25 Identities = 160/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| || ||| | ||||| ||||||| ||||| || Sbjct 1066762 ATGCAAATCTTCGTCAAGACTTTGACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCC 1066703 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || ||||| | || | ||| | || | ||| ||||| ||||| || || ||||| | Sbjct 1066702 GATACGATCGA-TAACGTAAAGTCCAAGATTCA-AGACAAGGAAGGTATCCCTCCTGATC 1066645 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || | ||||| ||||| |||||| | ||||| | ||| ||| | ||| |||| Sbjct 1066644 AGCAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACA 1066585 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| || || || || ||||| || || Sbjct 1066584 ACATCCAAAAGGAGTCTACACTTCATTTGGTTCT 1066551 Score = 91.5 bits (100), Expect = 1e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| || |||||||| || ||| | ||||| | || || ||||| || Sbjct 1066535 AATGCAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTC 1066476 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || ||||| |||| | || | ||| ||||| || || ||||||||||| | Sbjct 1066475 CGATACGATCGATAATGTGAAATCCAAGATTCAA-GACAAGGAGGGTATTCCACCTGATC 1066417 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATG 25155 | ||||| |||| ||||| || || || | ||||||| Sbjct 1066416 AGCAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATG 1066378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327176135140