Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 5e-25
>seq1
Length=1746732
Score = 129 bits (142), Expect = 5e-25
Identities = 160/214 (75%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||| || ||| | ||||| ||||||| ||||| ||
Sbjct 1066762 ATGCAAATCTTCGTCAAGACTTTGACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCC 1066703
Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| || ||||| | || | ||| | || | ||| ||||| ||||| || || ||||| |
Sbjct 1066702 GATACGATCGA-TAACGTAAAGTCCAAGATTCA-AGACAAGGAAGGTATCCCTCCTGATC 1066645
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | ||||| ||||| |||||| | ||||| | ||| ||| | ||| ||||
Sbjct 1066644 AGCAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACA 1066585
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| || ||||| || || || || ||||| || ||
Sbjct 1066584 ACATCCAAAAGGAGTCTACACTTCATTTGGTTCT 1066551
Score = 91.5 bits (100), Expect = 1e-13
Identities = 117/159 (74%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| || |||||||| || ||| | ||||| | || || ||||| ||
Sbjct 1066535 AATGCAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTC 1066476
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| || ||||| |||| | || | ||| ||||| || || ||||||||||| |
Sbjct 1066475 CGATACGATCGATAATGTGAAATCCAAGATTCAA-GACAAGGAGGGTATTCCACCTGATC 1066417
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATG 25155
| ||||| |||| ||||| || || || | |||||||
Sbjct 1066416 AGCAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATG 1066378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327176135140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |