Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 118 9e-22 seq13 82.4 6e-11 >seq1 Length=1746732 Score = 118 bits (130), Expect = 9e-22 Identities = 133/178 (75%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| |||||||| || || ||||| |||| | || || || | || Sbjct 1066534 ATGCAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTCC 1066475 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| || |||||||||||||||||||||||||| ||||| Sbjct 1066474 GATACGATCGATAATGTGAAATCCAAGATTCAAGACAAGGAGGGTATTCCACCTGATCAG 1066415 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 || |||||||| ||||| || || ||| | || ||| | | || | || ||||||| Sbjct 1066414 CAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACATTGTCTGATTACA 1066357 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || || ||||| ||||||| ||||| || | || Sbjct 1066762 ATGCAAATCTTCGTCAAGACTTTGACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCC 1066703 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | || || |||||||||||||| ||||| || || ||||| Sbjct 1066702 GATACGATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTGATCAG 1066643 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || ||||| ||||| | || || || || ||||||| |||||| Sbjct 1066642 CAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAAC 1066583 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| || || || | ||||| ||| | ||| | || || || Sbjct 1066582 ATCCAAAAGGAGTCTACACTTCATTTGGTTCTCCGACTTCGTGGTGG 1066536 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || || |||||||||||||| ||||| |||||||||||||| || || |||||||| ||| Sbjct 1264589 ATCCAGGACAAGGAGGGTATCCCACCTGATCAACAACGTCTCATCTTCGCCGGCAAGCAG 1264530 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||| || || ||||||| |||| Sbjct 1264529 CTCGAAGATGGACGAACTCTCTCCGACTACA 1264499 >seq13 Length=658505 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || ||||| || |||| || || || || | |||| ||| | ||| || |||| Sbjct 564011 ACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGTCC 563952 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| ||||| |||||||| | | || || || || || Sbjct 563951 AAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGGAAAG 563892 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| | || | || ||||||||||| || || || || || | ||| Sbjct 563891 CAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCTTCAT 563832 Query 22423 TTAGT 22427 || || Sbjct 563831 TTGGT 563827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727201992140