Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 9e-22
seq13 82.4 6e-11
>seq1
Length=1746732
Score = 118 bits (130), Expect = 9e-22
Identities = 133/178 (75%), Gaps = 0/178 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| |||||||| || || ||||| |||| | || || || | ||
Sbjct 1066534 ATGCAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTCC 1066475
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | ||| || |||||||||||||||||||||||||| |||||
Sbjct 1066474 GATACGATCGATAATGTGAAATCCAAGATTCAAGACAAGGAGGGTATTCCACCTGATCAG 1066415
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
|| |||||||| ||||| || || ||| | || ||| | | || | || |||||||
Sbjct 1066414 CAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACATTGTCTGATTACA 1066357
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||||| || || ||||| ||||||| ||||| || | ||
Sbjct 1066762 ATGCAAATCTTCGTCAAGACTTTGACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCC 1066703
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | | || || |||||||||||||| ||||| || || |||||
Sbjct 1066702 GATACGATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTGATCAG 1066643
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || ||||| ||||| | || || || || ||||||| ||||||
Sbjct 1066642 CAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAAC 1066583
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| ||||| || || || | ||||| ||| | ||| | || || ||
Sbjct 1066582 ATCCAAAAGGAGTCTACACTTCATTTGGTTCTCCGACTTCGTGGTGG 1066536
Score = 84.2 bits (92), Expect = 2e-11
Identities = 73/91 (80%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365
|| || |||||||||||||| ||||| |||||||||||||| || || |||||||| |||
Sbjct 1264589 ATCCAGGACAAGGAGGGTATCCCACCTGATCAACAACGTCTCATCTTCGCCGGCAAGCAG 1264530
Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || ||| || || ||||||| ||||
Sbjct 1264529 CTCGAAGATGGACGAACTCTCTCCGACTACA 1264499
>seq13
Length=658505
Score = 82.4 bits (90), Expect = 6e-11
Identities = 129/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| ||||| || |||| || || || || | |||| ||| | ||| || ||||
Sbjct 564011 ACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGTCC 563952
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || |||||||||||||| ||||| |||||||| | | || || || || ||
Sbjct 563951 AAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGGAAAG 563892
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | |||||| | || | || ||||||||||| || || || || || | |||
Sbjct 563891 CAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCTTCAT 563832
Query 22423 TTAGT 22427
|| ||
Sbjct 563831 TTGGT 563827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727201992140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |