Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq19 96.9 7e-15
seq12 93.3 9e-14
>seq19
Length=542337
Score = 96.9 bits (106), Expect = 7e-15
Identities = 132/182 (73%), Gaps = 3/182 (2%)
Strand=Plus/Minus
Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238
|| ||||| ||| | || ||||| ||| | |||| | |||| || |||||| || ||
Sbjct 176839 GGTCCCAACGGTTCCGGAAAGTCCACCTTGGTCAAGCTTTTGACCGGTGAGACCGAGCCC 176780
Query 280239 A--CTGAGGGGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295
| || | ||| | | |||||||| |||||| || || | |||||| |||||||||
Sbjct 176779 AACCTCGGTGGTGAGGTGTGGAAGCACCCCAACTTGGTTATCGGTTACGTTGCTCAGCAC 176720
Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355
||||||||||||||||| |||| || |||| || || | | ||||| ||||||
Sbjct 176719 GCTTTCCACCACATCGATCACCATCTCGACAAAACCCCGCTCGACTACATGTTGTGGCGA 176660
Query 280356 TA 280357
||
Sbjct 176659 TA 176658
Score = 91.5 bits (100), Expect = 3e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
||||| || || |||||||||||||||||||| || ||| |||| ||||| | |
Sbjct 177322 GGTTCCCTCTCCGGTGGTTGGAAGATGAAGCTCGCTCTCGCTCGAGCCATCTTGTTCAAG 177263
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|| ||| |||| || || || ||||| ||||| || |||| |||||| |||||
Sbjct 177262 GCTGATATCCTTCTCCTCGACGAGCCTACCAATCATTTGGATGTTGTCAACGTCACCTGG 177203
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| | |||||| || || | || | | ||| |||| ||||| |||||||||
Sbjct 177202 CTCATCGACTACCTCACTTCCCTCACCAACTGTACCTCCATCATCGTCTCCCACGACTCT 177143
Query 279879 GGCTTCCT 279886
| ||||||
Sbjct 177142 GACTTCCT 177135
>seq12
Length=685287
Score = 93.3 bits (102), Expect = 9e-14
Identities = 270/411 (66%), Gaps = 6/411 (1%)
Strand=Plus/Plus
Query 218466 CTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAGACCAACA--TCCCCGTCCCTGACTTC 218523
||| |||||||||| | | | ||||| ||| | ||| |||| || ||||||
Sbjct 584484 CTTTCAGCCCGGAACCTACCTTGACCA--CGATATCAGACAGGTCCCTCTCAAGGACTTC 584541
Query 218524 ATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGCGTG 218583
||| |||||||||| || || |||||| | || || || || || ||
Sbjct 584542 ATCAACAAGGAGCTAATCCTCTTCTCGATGGCCGACAATATCCGATCCATCCCGTCAGTC 584601
Query 218584 GTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCTG 218643
| || ||| | || || ||||| ||| |||| || | |||||| |||| ||
Sbjct 584602 GCTGACGGCTTGAAACCTGGCCAGCGCAAGGTCCTATTCGGTTGCTTCAAGAGGAAACTT 584661
Query 218644 GTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCAT 218703
|| | || || || || || || || | ||||| || || || | || ||||||
Sbjct 584662 GTAAAGGAGATCAAAGTTGCGCAACTTGCCGGTTACGTTTCTGAGAAGACTTCTTACCAT 584721
Query 218704 CACGGTGAGCAGAGTCTGCAGGGTGCC-ATTGTAGGCATGGCACAGGACTATGTGGGCAG 218762
||||| || |||||| || | || | || || || | || || || |||||| ||
Sbjct 584722 CACGGCGAACAGAGTTTG-ACCATGACTATCGTCGGTCTCGCTCAAACCTTTGTGGGAAG 584780
Query 218763 TAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAA 218822
|||||||| |||||||| |||||||||||| || ||| ||||| ||| |||||
Sbjct 584781 CAACAACATCAACTTGCTCGACCCCAACGGTCAATTCGGTACTCGTGCTCAGGGAGGAAA 584840
Query 218823 GGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCG 218873
|| |||| ||| | || || ||||| || || | | | |||| ||
Sbjct 584841 AGACGCTGCTAGTGCTCGTTACATTTTTACCAACGTGCCACGCATGACTCG 584891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834745611196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |