Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 9e-32
seq13 138 2e-27
seq8 138 2e-27
seq19 123 5e-23
>seq1
Length=1746732
Score = 152 bits (168), Expect = 9e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || ||||| || | ||||| || || || ||||| ||||||||||| || ||||
Sbjct 1066534 TTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGG 1066593
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
|||| || | || ||||| | || || |||||||| || | || || || || || |
Sbjct 1066594 AGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAG 1066653
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| || |||||||||||||||||||| | ||| ||| ||||| || || | || || |
Sbjct 1066654 GGATACCTTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGA 1066713
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| | ||||| ||||| || || | ||||||||||| || |||||
Sbjct 1066714 CTTCGAGAGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762
Score = 116 bits (128), Expect = 7e-21
Identities = 132/177 (75%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345
||||| || | |||||| |||||||| | |||||| || || || || || | || ||
Sbjct 1066359 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 1066418
Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405
|| |||||||| || ||||||||||||||||| | || || ||||| || || |
Sbjct 1066419 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGGAA 1066478
Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| ||||| ||||| ||||| ||||| || || | || ||||| || || ||||||
Sbjct 1066479 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535
>seq13
Length=658505
Score = 138 bits (152), Expect = 2e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | ||||| || || || ||||| || |||||||| ||||| ||
Sbjct 563809 CCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGAT 563868
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| ||||| ||||| || | |||||| || ||||| || | || ||||| || |||||
Sbjct 563869 AGAGTCCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGG 563928
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | |||||| ||||||||||| | || || ||
Sbjct 563929 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 563988
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAG 68440
|| | ||||||||| || || || ||
Sbjct 563989 TCGAGGGTGATGGTCTTACCTGTAAG 564014
>seq8
Length=789079
Score = 138 bits (152), Expect = 2e-27
Identities = 214/303 (71%), Gaps = 2/303 (1%)
Strand=Plus/Minus
Query 268427 CCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAAC 268486
|||||||||||||||||||| || | ||| | |||||| ||||| ||||||| ||| ||
Sbjct 786371 CCGTTGCACGCGAACATGCCGTACGACTCCCTGTAGTTGACGACAATCCAGTACGCATAC 786312
Query 268487 ATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATT 268546
| ||| || || | || ||| | |||| || || ||||| | || || |
Sbjct 786311 AGCTTGGCGACACCATATGGACTCCTCGGATAAAACGGTGTCGTCTCACTCTGTGGCGTC 786252
Query 268547 TCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTT-TTTTC 268605
|| || | ||| | ||||| || ||||| || |||||||| | || || |||||
Sbjct 786251 TCGACAACCTGACCATAAAGCTCCGACGTCGAGGCCTGGTAGAA-TCTGACGTGCTTTTC 786193
Query 268606 GAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGC 268665
||||||||| | |||||||| || || | || || || |||| || || ||||| |
Sbjct 786192 GAGACCGCAAGTGCGGATTGCGTCCAGGATGCGGAGCGTACCCAGTCCGTCGACGTCTCC 786133
Query 268666 TGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAAC 268725
||| ||||| | ||||||||| || |||| ||| || ||| || | ||||| || |
Sbjct 786132 TGTGTACTCGGCCATCTCGAACGAGACCTTGACGTGCGACTGAGCAGCTAGGTTGTAGAT 786073
Query 268726 CTC 268728
|||
Sbjct 786072 CTC 786070
Score = 129 bits (142), Expect = 1e-24
Identities = 212/303 (70%), Gaps = 2/303 (1%)
Strand=Plus/Minus
Query 268427 CCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAAC 268486
|| ||||| || |||| || || | || | |||||| || || ||||||||||| ||
Sbjct 720494 CCATTGCAAGCATACATTCCGTACGATTCCCTGTAGTTGACAACGATCCAGTATGCATAC 720435
Query 268487 ATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATT 268546
| |||||| ||| | |||||| | |||| || || || || |||||| ||
Sbjct 720434 AGCTTTGCGACTCCATACGGACTCCTCGGATAAAACGGTGTAGTCTCAGATTGAGGTATC 720375
Query 268547 TCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGT-TTTTTC 268605
|| | || |||||| |||| || || || || ||||||||||| | || || ||||||
Sbjct 720374 TCCTGAACCTTGCCATAGAGTTCCGACGTAGAAGCTTGGTAGAA-TCTGACGTGTTTTTC 720316
Query 268606 GAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGC 268665
| ||||| |||| || || ||||| | ||||| || || | ||||| || || ||
Sbjct 720315 CAAGCCGCATGTTCGAATAGCATCGAGGACTCGAAGTGTGCCTAATCCATCAACATCTGC 720256
Query 268666 TGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAAC 268725
||| ||||| | ||| ||||| || || | ||| || || || || ||||| || |
Sbjct 720255 TGTGTACTCGGCCATTTCGAAGGATACTTTGACGTGAGATTGTGCACCGAGGTTGTAGAA 720196
Query 268726 CTC 268728
|||
Sbjct 720195 CTC 720193
>seq19
Length=542337
Score = 123 bits (136), Expect = 5e-23
Identities = 146/195 (75%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTGAGGTG 225507
|||||| ||||||||||||| || |||||||| | ||| ||| || ||| ||||||
Sbjct 177135 AGGAAGTCAGAGTCGTGGGAGACGATGATGGAGGTACA-GTTGGTGAGGGAAGTGAGGTA 177193
Query 225508 CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAG 225567
||||||||| | |||||| || |||| || || ||||| ||||| || || ||
Sbjct 177194 GTCGATGAGCCAGGTGACGTTGACAACATCCAAATGATTGGTAGGCTCGTCGAGGAGAAG 177253
Query 225568 GATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGA 225627
||| ||||| | | | |||||| || | ||||| |||||||| ||||| || |||||
Sbjct 177254 GATATCAGCCTTGAACAAGATGGCTCGAGCGAGAGCGAGCTTCATCTTCCAACCACCGGA 177313
Query 225628 CAGGGAGCCGATTGA 225642
||||| ||||| ||
Sbjct 177314 GAGGGAACCGATCGA 177328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921620602836320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |