Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 152 9e-32 seq13 138 2e-27 seq8 138 2e-27 seq19 123 5e-23 >seq1 Length=1746732 Score = 152 bits (168), Expect = 9e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || ||||| || | ||||| || || || ||||| ||||||||||| || |||| Sbjct 1066534 TTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGG 1066593 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 |||| || | || ||||| | || || |||||||| || | || || || || || | Sbjct 1066594 AGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAG 1066653 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || |||||||||||||||||||| | ||| ||| ||||| || || | || || | Sbjct 1066654 GGATACCTTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGA 1066713 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| | ||||| ||||| || || | ||||||||||| || ||||| Sbjct 1066714 CTTCGAGAGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762 Score = 116 bits (128), Expect = 7e-21 Identities = 132/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 ||||| || | |||||| |||||||| | |||||| || || || || || | || || Sbjct 1066359 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 1066418 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || |||||||| || ||||||||||||||||| | || || ||||| || || | Sbjct 1066419 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGGAA 1066478 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| ||||| ||||| ||||| || || | || ||||| || || |||||| Sbjct 1066479 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535 >seq13 Length=658505 Score = 138 bits (152), Expect = 2e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || || || ||||| || |||||||| ||||| || Sbjct 563809 CCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGAT 563868 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||| ||||| || | |||||| || ||||| || | || ||||| || ||||| Sbjct 563869 AGAGTCCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGG 563928 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | |||||| ||||||||||| | || || || Sbjct 563929 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 563988 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAG 68440 || | ||||||||| || || || || Sbjct 563989 TCGAGGGTGATGGTCTTACCTGTAAG 564014 >seq8 Length=789079 Score = 138 bits (152), Expect = 2e-27 Identities = 214/303 (71%), Gaps = 2/303 (1%) Strand=Plus/Minus Query 268427 CCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAAC 268486 |||||||||||||||||||| || | ||| | |||||| ||||| ||||||| ||| || Sbjct 786371 CCGTTGCACGCGAACATGCCGTACGACTCCCTGTAGTTGACGACAATCCAGTACGCATAC 786312 Query 268487 ATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATT 268546 | ||| || || | || ||| | |||| || || ||||| | || || | Sbjct 786311 AGCTTGGCGACACCATATGGACTCCTCGGATAAAACGGTGTCGTCTCACTCTGTGGCGTC 786252 Query 268547 TCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTT-TTTTC 268605 || || | ||| | ||||| || ||||| || |||||||| | || || ||||| Sbjct 786251 TCGACAACCTGACCATAAAGCTCCGACGTCGAGGCCTGGTAGAA-TCTGACGTGCTTTTC 786193 Query 268606 GAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGC 268665 ||||||||| | |||||||| || || | || || || |||| || || ||||| | Sbjct 786192 GAGACCGCAAGTGCGGATTGCGTCCAGGATGCGGAGCGTACCCAGTCCGTCGACGTCTCC 786133 Query 268666 TGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAAC 268725 ||| ||||| | ||||||||| || |||| ||| || ||| || | ||||| || | Sbjct 786132 TGTGTACTCGGCCATCTCGAACGAGACCTTGACGTGCGACTGAGCAGCTAGGTTGTAGAT 786073 Query 268726 CTC 268728 ||| Sbjct 786072 CTC 786070 Score = 129 bits (142), Expect = 1e-24 Identities = 212/303 (70%), Gaps = 2/303 (1%) Strand=Plus/Minus Query 268427 CCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAAC 268486 || ||||| || |||| || || | || | |||||| || || ||||||||||| || Sbjct 720494 CCATTGCAAGCATACATTCCGTACGATTCCCTGTAGTTGACAACGATCCAGTATGCATAC 720435 Query 268487 ATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATT 268546 | |||||| ||| | |||||| | |||| || || || || |||||| || Sbjct 720434 AGCTTTGCGACTCCATACGGACTCCTCGGATAAAACGGTGTAGTCTCAGATTGAGGTATC 720375 Query 268547 TCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGT-TTTTTC 268605 || | || |||||| |||| || || || || ||||||||||| | || || |||||| Sbjct 720374 TCCTGAACCTTGCCATAGAGTTCCGACGTAGAAGCTTGGTAGAA-TCTGACGTGTTTTTC 720316 Query 268606 GAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGC 268665 | ||||| |||| || || ||||| | ||||| || || | ||||| || || || Sbjct 720315 CAAGCCGCATGTTCGAATAGCATCGAGGACTCGAAGTGTGCCTAATCCATCAACATCTGC 720256 Query 268666 TGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAAC 268725 ||| ||||| | ||| ||||| || || | ||| || || || || ||||| || | Sbjct 720255 TGTGTACTCGGCCATTTCGAAGGATACTTTGACGTGAGATTGTGCACCGAGGTTGTAGAA 720196 Query 268726 CTC 268728 ||| Sbjct 720195 CTC 720193 >seq19 Length=542337 Score = 123 bits (136), Expect = 5e-23 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTGAGGTG 225507 |||||| ||||||||||||| || |||||||| | ||| ||| || ||| |||||| Sbjct 177135 AGGAAGTCAGAGTCGTGGGAGACGATGATGGAGGTACA-GTTGGTGAGGGAAGTGAGGTA 177193 Query 225508 CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAG 225567 ||||||||| | |||||| || |||| || || ||||| ||||| || || || Sbjct 177194 GTCGATGAGCCAGGTGACGTTGACAACATCCAAATGATTGGTAGGCTCGTCGAGGAGAAG 177253 Query 225568 GATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGA 225627 ||| ||||| | | | |||||| || | ||||| |||||||| ||||| || ||||| Sbjct 177254 GATATCAGCCTTGAACAAGATGGCTCGAGCGAGAGCGAGCTTCATCTTCCAACCACCGGA 177313 Query 225628 CAGGGAGCCGATTGA 225642 ||||| ||||| || Sbjct 177314 GAGGGAACCGATCGA 177328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620602836320